Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01117 ATGGCGGGAGGTCACATTTCCAGATCCACCTACGATGTGTTCTTGAGTTTCAGAGGAGAAGATACCCGCTATGGTTTTACAAAGTATCTCTACGATGCTTTGACTCAAAATGATATCGAAGCTTTCATGGACGGAGAGAATCTGGGTAAGGGTGAGGAGATCGATGATGTTCTTGTCAAGGCCATTGAAGGGTCAAAGATAGCAATCATCGTGTTTTCTGAAACCTATGCTTCTTCCACATGGTGCCTTGACGAACTGCTCAAGATTCTTGAGTGTAAGAACCGGAAAGGGCAGCTGGTTATACCAGTCTTTTACAAAGTGGAGCCTACAACTGTTCGGAAACAACGGGATTCTTATGGGGAAGCCATGATTATTCACGAAGACAGGTTTGAAGATGACATTGAAAAGGTCCAACGATGGAGGTCGGCTTTGTTCAAAGCAGCCAGCATATCGGGTTGGGATACTAAAAATAAGTTCGAAGGTGATCTTATTAAAGACATAGTCAAAGATGTGTCTGGAAAATTGAAAACATTTGCTTCCAATGGATCACAGAAGTCACAAGCAACTGCACGACCTTATGGGGTCAATAATGACGTTGGAAAAGAGAAGCAAGTCTCTGCTGTGGAGGATGATGTCTATCATAACTGGAGTGATATGGCTACGGCAACTTCAGAAATAATGAAGGCGAACAACCCAATGTCTGAAGTGGAAAATGGTGTGTACAACAGTTGGAATAGGAGCTATGTGGATTCATCAGGTGCAGTATCAAAGGTAGGCAATCACAAATCAGAAGCTACCGAGGATGAAGAAAACAGGTTGTGGTCCTTCGGCGATTCAAGCAAGTTTCTTGAATTGAACAATGGATTGGGATATATATTAAGTGCGATATCAGAGAAGGGAACCTTTGGAATGCGACACATTGTTGGATTGAAAAACAATTTGAAGGTGATGGCCGTGAAAAGATTAAAGAAAACGAGAATTTCAAACGAGGATTTCAAGAGCGTCGTTGAACCTATTGGAGCAATGCATCATCAAAATTTGCTCAAACTTGGGGCTTACTATTGGAGTAAGGAGGAAAAAGTCCTATTTTATGATTTCAAGCCAAACCGAAGCCTATGCTTACATTTGCATGGCAACAAGCGCAGCAAAATGATGGATTGGGAAATGAGATTGAAAATTGCTGTTGAAACTGCTCGTGGAATCACATACATTCATCAGTATCACAATCTTCCCCATGGAAACATAAAATCATCTAACATTATCCTTACAGACTTATATCAGGCCTGTGTGTCAGAATATTGTTTAACACCACTTGATGATCCCTCCTCACCCATAAAAAATGATGGCTACTCTGCTCCTGAAGTCACAGTTCCTCACAGAGTAACCCTCGAGAGTGATGTCTACAGCTTTGGAGTAGTGCTTATGGAACTTGTGACTGAAAAGAATCCCACCAGCTTCAAGAAGGATGAAGGTGGCCTTCCCAGATGGGTAAAGTCCATGGCTGAAAGTAACTCAATTTATCAAGTAATTCCTAACCGGTTCCACTCCCAAGATTCAATTGTAATGTGTCAGCTGTTGCAAGTTGCAATTACATGTACTGTACCAAATCCTGGTGAGCGTCCTACAATGCTTGAAGTGACCCAGTACATCGAACAACTCAAGCAATCCAGCATGAAACGTTATCCGACTTCGATGATGTGTAACACAGCAGATAACATAGCGTTTAACTATCAGCGAGTGACGTATGATGACAGGGGACATCCTACAGTACACCGGTGGACAGAAGTCAAATACCGAGAAGATTTAAGTAGGATATCTATGTCCAGTTCGTTGGGAGCTTACCCAATCTGA 1851 0.4214 MAGGHISRSTYDVFLSFRGEDTRYGFTKYLYDALTQNDIEAFMDGENLGKGEEIDDVLVKAIEGSKIAIIVFSETYASSTWCLDELLKILECKNRKGQLVIPVFYKVEPTTVRKQRDSYGEAMIIHEDRFEDDIEKVQRWRSALFKAASISGWDTKNKFEGDLIKDIVKDVSGKLKTFASNGSQKSQATARPYGVNNDVGKEKQVSAVEDDVYHNWSDMATATSEIMKANNPMSEVENGVYNSWNRSYVDSSGAVSKVGNHKSEATEDEENRLWSFGDSSKFLELNNGLGYILSAISEKGTFGMRHIVGLKNNLKVMAVKRLKKTRISNEDFKSVVEPIGAMHHQNLLKLGAYYWSKEEKVLFYDFKPNRSLCLHLHGNKRSKMMDWEMRLKIAVETARGITYIHQYHNLPHGNIKSSNIILTDLYQACVSEYCLTPLDDPSSPIKNDGYSAPEVTVPHRVTLESDVYSFGVVLMELVTEKNPTSFKKDEGGLPRWVKSMAESNSIYQVIPNRFHSQDSIVMCQLLQVAITCTVPNPGERPTMLEVTQYIEQLKQSSMKRYPTSMMCNTADNIAFNYQRVTYDDRGHPTVHRWTEVKYREDLSRISMSSSLGAYPI* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01117 616 ProSiteProfiles Protein kinase domain profile. 291 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01117 616 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 153 IPR035897 -
Pte5g01117 616 Gene3D Phosphorylase Kinase; domain 1 293 366 - -
Pte5g01117 616 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 177 - -
Pte5g01117 616 Pfam TIR domain 11 189 IPR000157 GO:0007165
Pte5g01117 616 Gene3D Transferase(Phosphotransferase) domain 1 368 574 - -
Pte5g01117 616 ProSiteProfiles TIR domain profile. 9 175 IPR000157 GO:0007165
Pte5g01117 616 SUPERFAMILY Protein kinase-like (PK-like) 299 565 IPR011009 -
Pte5g01117 616 Pfam Protein tyrosine and serine/threonine kinase 313 548 IPR001245 GO:0004672|GO:0006468
Pte5g01117 616 Gene3D - 6 180 IPR035897 -
Pte5g01117 616 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 293 557 IPR046959 -
Pte5g01117 616 SMART till_3 10 150 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01117 Pte-Chr5 32064663 32067801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01117 245 560 Receptor kinase-like Gene Family AT3G17840 41.742 4.65e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte5g01117 PK_Tyr_Ser-Thr 2.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01117 - - qsa:O6P43_008468 244.588