LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte5g01108	ATGGGGGGTGGAACTACACTGGTGGACGGTATTCGTCGCTTGTTTCAGCGACGTACTTCTGATCATCACAGCAACAGTACTAATGCAGAAAACCTTGATGATGACATCAATAGGACTACCACCAAGCAAGAAGGGGAGCTCATCATTATTGAGGAAGACTTTGATGTGATTGGACTGAAGCGTCTAAGAGTGCCTAGAAGAATTAAATTTGGACCTGCTCCTATGGATCCTCATAAGAAGGACGCCGAGTTTTTTACCGAGTATGGAGAGGCAAGTCGATATCAGATCCAAGAAGTTGTTGGGAAAGGAAGCTATGGTGTAGTTGCTTCAGCTGTTGACACCCATACTGGAGAAAAAGTTGCAATTAAGAAAATTAATGATGTATTTGAACATGTTTCTGATGCTACGCGAATCCTGAGAGAAATCAAACTTCTTCGTTTGCTTCGCCATCCTGACATTGTAGAAATTAAGCATATTATGCTTCCTCCATCACGCCGTGAGTTCAGAGATATCTATGTTGTGTTTGAGCTCATGGAATCAGATCTTCATCAAGTAATTAAGGCTAATGATGATCTTACTCCTGAGCACTATCAGTTTTTCTTGTACCAACTTCTTCGGGGTTTGAAGTATATACACACAGCGAACGTGTTTCATCGTGACTTAAAGCCCAAAAACATTCTTGCTAATGCTGATTGCAAACTGAAGATATGTGATTTTGGGCTTGCTCGAGTTTCTTTCAATGATGCTCCATCTGCTATATTCTGGACTGATTATGTTGCAACAAGATGGTATCGTGCACCTGAGTTATGTGGTTCATTCTTCTCAAAGTATACCCCTGGAATTGATATTTGGAGCATTGGATGCATATTTGCGGAGATTCTTATGGGGAAACCACTTTTTCCTGGTAGAAATGTTGTACACCAATTGGATCTCATGACAGATTTTCTTGGCACTCCTCCTCCTGAGGCCATTTTGAGGATTCGTAATGAAAAGGCTAGAAGGTACCTTAGCAACATGAGGAAAAAACCACCACAGCCATTTTCACACAAGTTCCCAAATGCAGATCCATTGGCTCTCCGCTTGTTAGAGCGTCTGCTTGCATTTGACCCTAAAGATCGCCCAACAGCTGAAGAGGCATTAGCTGATCCATACTTCAATGGATTGGCCAGCAAGGATCATGAACCATCAACACAGCCTATATCAAAACTTGAGTTTGAATTTGAGAGGAGAAAAATAACTAAAGATGATGTAAGAGAGTTGATCTACCGAGAGATTCTGGAGTATCATCCTGAGATGCTGCAAGAGTATCTTCGTGGTGGAGAGCAGACAAGCTTCATGTACCCAAGTGGGATTGATCGTTTCAAGAGACAGTTTGCACATCTTGAGGAGTTTGGTAAAGGTGGACGAGGCTCTCCACTGCAGAGGCAGCATGTCTCCTTACCTAGAGAGCGGGTTTGTATGCCAAAGGAACTGCCTGATCAAATTGCCGAACTCGAAAAACGAACTGCAGCTTCTGCTCTTGAAAGTCCTCCAGGACAAGATGGTATAGATGCAACAAATGTAGATGGCCAAAATGGTCCAAGCAAGCCCAACTGCAGCGCACGCAGTCTACTAAAGAGTGCAAGCATTAGTGGCTCGAAGTGTATAGGTGAAACACCAAAAAACATTCCTGGGGAGGAGCCAATTGAAGAGGTCATTGAAGAAGCAGGCAGTAGAAGAGTAGACTCAAAATGTTGCAGCTCATCACGCTTGATGCAGCCTGTTCCTTATACTCCATAA	1779	0.4311	MGGGTTLVDGIRRLFQRRTSDHHSNSTNAENLDDDINRTTTKQEGELIIIEEDFDVIGLKRLRVPRRIKFGPAPMDPHKKDAEFFTEYGEASRYQIQEVVGKGSYGVVASAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEILMGKPLFPGRNVVHQLDLMTDFLGTPPPEAILRIRNEKARRYLSNMRKKPPQPFSHKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFNGLASKDHEPSTQPISKLEFEFERRKITKDDVRELIYREILEYHPEMLQEYLRGGEQTSFMYPSGIDRFKRQFAHLEEFGKGGRGSPLQRQHVSLPRERVCMPKELPDQIAELEKRTAASALESPPGQDGIDATNVDGQNGPSKPNCSARSLLKSASISGSKCIGETPKNIPGEEPIEEVIEEAGSRRVDSKCCSSSRLMQPVPYTP*	593

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte5g01108	592	CDD	STKc_TDY_MAPK	93	430	-	-
	Pte5g01108	592	FunFam	Mitogen-activated protein kinase	83	188	-	-
	Pte5g01108	592	MobiDBLite	consensus disorder prediction	568	592	-	-
	Pte5g01108	592	Pfam	Protein kinase domain	94	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte5g01108	592	Gene3D	Phosphorylase Kinase; domain 1	110	431	-	-
	Pte5g01108	592	ProSitePatterns	MAP kinase signature.	129	232	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
	Pte5g01108	592	SMART	serkin_6	94	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte5g01108	592	MobiDBLite	consensus disorder prediction	505	534	-	-
	Pte5g01108	592	MobiDBLite	consensus disorder prediction	518	534	-	-
	Pte5g01108	592	ProSitePatterns	Protein kinases ATP-binding region signature.	100	124	IPR017441	GO:0005524
	Pte5g01108	592	ProSiteProfiles	Protein kinase domain profile.	94	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte5g01108	592	MobiDBLite	consensus disorder prediction	575	592	-	-
	Pte5g01108	592	Gene3D	Transferase(Phosphotransferase) domain 1	180	408	-	-
	Pte5g01108	592	MobiDBLite	consensus disorder prediction	17	38	-	-
	Pte5g01108	592	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	93	433	-	-
	Pte5g01108	592	SUPERFAMILY	Protein kinase-like (PK-like)	90	389	IPR011009	-
	Pte5g01108	592	FunFam	Mitogen-activated protein kinase	180	408	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte5g01108	Pte-Chr5	31777809	31782578	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte5g01108	1	580	MAP Kinase Gene Family	AT1G73670	70.289	0.0	810

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Pte5g01108		Pkinase	1.5e-66	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte5g01108	-		-	zju:107434116	862.448