Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01107 ATGAGAAAATCTTCCTTTGAGAAGAAAGACACTGCCAAAGGATCTTGTTCCAAACAAGAGGACAAGAAAATCATTACCCGCATACATAAACATGGGGAAAGCTCCTCCAAGTCACTTCCACAAGCTTCAGGACTGCATCGTTACGGAAAATGCTTTCGCCGACGTGACTTTGGAGAGGATGAAGAAGACTTGATCATCAGGCTCCATGGACTCCTTGGCGACAGGTGGTCTCTCATAGCCGGAAGATTGCCGGGAAGGACTGACAGCGAAGTGAAGAGTTACTGGGATTCCCACATCAAGAACAAGCTAAAAATGATGGGTCATGATCCTAATAAACACCATCTAAACAAAATAAGCAACACAAAAATGCATGCTGGGAAAGCTGTTGGAACCAATGACCAGATGCAGACAACTTCCAATAGTACTGTTAACTCCGAGGCCATGGATAATTATGGCTTTCCTTCTGTAGATGACACTGAAATCATCATGTCCAGTGCTACTGTACCTGCTTTGAATCTTGATCTCACACTCAGCACTCCACAGATTTACCCCACAGAAAATGGAGGAGAGCATCAATTAGCAGGTTAA 588 0.4405 MRKSSFEKKDTAKGSCSKQEDKKIITRIHKHGESSSKSLPQASGLHRYGKCFRRRDFGEDEEDLIIRLHGLLGDRWSLIAGRLPGRTDSEVKSYWDSHIKNKLKMMGHDPNKHHLNKISNTKMHAGKAVGTNDQMQTTSNSTVNSEAMDNYGFPSVDDTEIIMSSATVPALNLDLTLSTPQIYPTENGGEHQLAG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01107 195 SUPERFAMILY Homeodomain-like 55 109 IPR009057 -
Pte5g01107 195 MobiDBLite consensus disorder prediction 1 43 - -
Pte5g01107 195 Gene3D - 56 140 - -
Pte5g01107 195 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 103 IPR017930 -
Pte5g01107 195 MobiDBLite consensus disorder prediction 1 34 - -
Pte5g01107 195 Pfam Myb-like DNA-binding domain 55 97 IPR001005 -
Pte5g01107 195 CDD SANT 59 99 IPR001005 -
Pte5g01107 195 ProSiteProfiles Myb-like domain profile. 53 99 IPR001005 -
Pte5g01107 195 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 141 - -
Pte5g01107 195 SMART sant 53 101 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01107 Pte-Chr5 31761046 31762874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01107 2 180 MYB Transcription Factor Family AT2G16720 36.548 9.12e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte5g01107 Myb_DNA-binding 2.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01107 K09422 - zju:125422401 169.474