Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01092 ATGGGAAAAGGAAGTTTTGTCACAGAGAAAGTGAAGCTTCTTCTGGCATTGCTAGTTCTGCAGCTATGTTTTGCAGGGTTTCACATTGTCAGTAGACTTGCACTAAACATGGGTGTCAGCAAAGTTGTTTACCCTGTATATAGGAATGTCATCGCATTGCTTTTGTTGAGTCCATGTGCCTATTTCTTAGAAAAGGATCAGAGACCACCCCTCACATTTTCTTTACTAGCTCAGTTCTTCCTACTAGCTCTAGTGGGAATCACAGCAAACCAAGGGTTTTATATTTTGGGGTTGTACTACGCATCACCGACATTTGCTTCTGCTATGCAAAATTCTGTTCCTGCCATCACATTTGTCATGGCTTCAGCTTTAAGGCTCGAGGAGCTCAACATTTCGAAGAGATATGGACTGGCAAAAGTTCTAGGAACTGTAGCTTGTGTAGGAGGAGCCACTATAATCACTCTGTACAAAGGTCCACCTCTTCTTCATGAGGCGCAGCAAACACTAGGCATTCATCTTCTGGAAGTTGATCCGAAGAAAATGCAAAACTGGACATGGGGTTGTATTTATTTACTTGGAAACTGCTTAGCATGGGCTGGTTGGATGGTATTTCAGGCTCCAGTAGTGAAGCAGTATCCTGCAAAACTCACAATGACATCATTCACATGCTTCTTCGGATTGATCCAGTTCCTGATCATAGCAGCCTTTGTAGAAACGGACTTAGATCACTGGAAGATACAATCAGGAAAAGAGATTCTTCTCATATTATACGCAGTAAGTTCTTTCAACCCATTCCACATGCTCTTCCATGTCCAACCAATGTTTATCTACATATCTAACATTCAAGGAAACCGCTTTGGTGTTCATCGTTCTTATTAG 879 0.4187 MGKGSFVTEKVKLLLALLVLQLCFAGFHIVSRLALNMGVSKVVYPVYRNVIALLLLSPCAYFLEKDQRPPLTFSLLAQFFLLALVGITANQGFYILGLYYASPTFASAMQNSVPAITFVMASALRLEELNISKRYGLAKVLGTVACVGGATIITLYKGPPLLHEAQQTLGIHLLEVDPKKMQNWTWGCIYLLGNCLAWAGWMVFQAPVVKQYPAKLTMTSFTCFFGLIQFLIIAAFVETDLDHWKIQSGKEILLILYAVSSFNPFHMLFHVQPMFIYISNIQGNRFGVHRSY* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01092 292 Pfam EamA-like transporter family 15 152 IPR000620 GO:0016020
Pte5g01092 292 Pfam EamA-like transporter family 186 258 IPR000620 GO:0016020
Pte5g01092 292 PANTHER WAT1-RELATED PROTEIN 14 261 IPR030184 GO:0016020|GO:0022857
Pte5g01092 292 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01092 Pte-Chr5 31479547 31480944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01092 1 258 Nodulin-like Gene Family AT3G18200 68.340 5.27e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01092 - - qsa:O6P43_005135 418.313