Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01078 ATGACGGCCAAAAGATTTCTTCAAGAAGCTGAATCAGACCCAGATAAACCTGCAGGCGAGAAAAGAATGAAAACCAGACCTTCTTTCGCTTCTGTCATAGGAGAAGTGGTAATGGTGAACAACTTGCAGAGCGTGTTCTCAACCTTGGAACCTTTGTTTCGAAGAGTGGTTAACGAAGAGGTGGAGAGGGCTTTAAGAGGCTATTCTTCAGGCGCCTTTGTCAACTCTCCTTCACTGAGGATTCAGTCAATGGAGCAACAAAGCAGCGGCTTACAATTGATTTTCAGCAAAAAGCTAAGTTTACCTATCTTCACAGGGAGCAAGATACTTGATGTTGACAACAAACAGCTTCAGATCCTTCTCGTCGAGAAGAGTGGGGATCGAATGATTGCAACAAGTCTTCCTCATGCAATCAGGCTAGAGATTGTGGTCCTTGATGGAGATTTTCCACCAAGTGATTATCAAGAGATGTGGACAAGTGAGGAGTTCAACAGTTTTATTGTGAAGGAGAGGACTGGCAAGCGTCCGTTGCTGACTGGAGAATTGAATCTGACAATGAGGGATGGAGCTGCGTCAGTTGGAGACATTGAGTTCACTGATAACTCAAGCTGGATACGGAGCAGAAGGTTCAGAGTTGCAGTAAGAGTTGTTCCAGGAAGTCATCAAGGTGTTAGGGTCCGTGAAGCAATTACTGAAGCTTTCATGGTGAAGGATCATCGTGGTGAACTGTACAAGAAACATCATCCACCGAGCCTAACCGACGAAGTGTGGCGGCTTGAGAAGATTGGAAAAGAAGGAGCTTTCCACAAGAAATTGTCTCTTGCTGGCATTAATACTGTGCAAGACTTTCTCAAGTTGTCAGTTGTGGACCCTTCAAAGCTCAGAAATATTTTAGGTGTTGGGATGTCAGAAAAGATGTGGGATGCTACAATAAAGCATGCAAGGACTTGTCTCTTAGTCAACAAGGTTCACATATTTCGTCAAAACCAGTGTGTAATTTATCTCAATCCCATATGCCAAGTGGTCAAAGCTGAAATCAGCGGTCAGACATATACTGCTAGGGATCTCACCAAATTATATAGGAACTATATCGAAAAACTTGTTAGAGAAGCATACACAAGGTGGAATTCCCTAGAGGTGGTGGATGGAATTTCCAATGACAACAGTACTGCTGGTTTATTGACACAAGGTGAAACGATGCAGCAGTACATGGCTCAAATGTATGGTTCAGATGAGTTCACGGTGGATAAATCCATTGAGATTGGATATCATGGAGTAAGCAATGTACAAATTGGAAGTAATAGTGATTGGCCAACGAATCCATCATATCCAACTTCGTTTGGAACTGGCATTCACTATAGCATCTCTGAATCATCTTCTGATGGTGATATAACACCGAGGTCTTTCATGAATGAGTGA 1419 0.4292 MTAKRFLQEAESDPDKPAGEKRMKTRPSFASVIGEVVMVNNLQSVFSTLEPLFRRVVNEEVERALRGYSSGAFVNSPSLRIQSMEQQSSGLQLIFSKKLSLPIFTGSKILDVDNKQLQILLVEKSGDRMIATSLPHAIRLEIVVLDGDFPPSDYQEMWTSEEFNSFIVKERTGKRPLLTGELNLTMRDGAASVGDIEFTDNSSWIRSRRFRVAVRVVPGSHQGVRVREAITEAFMVKDHRGELYKKHHPPSLTDEVWRLEKIGKEGAFHKKLSLAGINTVQDFLKLSVVDPSKLRNILGVGMSEKMWDATIKHARTCLLVNKVHIFRQNQCVIYLNPICQVVKAEISGQTYTARDLTKLYRNYIEKLVREAYTRWNSLEVVDGISNDNSTAGLLTQGETMQQYMAQMYGSDEFTVDKSIEIGYHGVSNVQIGSNSDWPTNPSYPTSFGTGIHYSISESSSDGDITPRSFMNE* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01078 472 Pfam Calmodulin binding protein C-terminal domain 322 380 IPR046829 -
Pte5g01078 472 PANTHER OS02G0177800 PROTEIN 4 444 IPR012416 GO:0005516
Pte5g01078 472 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
Pte5g01078 472 Pfam Calmodulin binding protein-like N-terminal domain 91 239 IPR046831 -
Pte5g01078 472 MobiDBLite consensus disorder prediction 1 24 - -
Pte5g01078 472 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01078 Pte-Chr5 31300549 31305029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01078 3 385 Calmodulin-binding Proteins AT5G57580 48.724 6.79e-116 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01078 - - qsa:O6P43_005112 592.808