Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01072 ATGGTGGTAGCAGCGGAGGCCTTGAGATTTTTGGCTAACTTGTGCCCATGTTTTGAGAAGCGAGTCAGAGCTGCAAGAGTAGGAAATGATTCCTCCAAGGATGCTGTAGAAACAGATACATGGGACCTTTTCTTCGACCTCAACACTATGCAATTAGCTACCAACTTCTTCTCCGAGCTTAACAAGTTGGGTCATGGCGGTTTTGGTCCTGTCTTCAAGGGATTGATGCCTGGCGGTCAAGAAGTAGCCGTTAAGAAACTGTCACTTGATTCAAGACAAGGAGTCAGAGAATTCACCAATGAGGTCAAATTGCTTCTGAAGCTTCAGCACAAGAACCTGGTTACATTATTGGGGTGTTGTGTTGAAGGACCAGAGAAAATGCTAGTGTATGAGTATCTGCCTAACAAAAGCCTTGATTATTTCATCTTCGACAAACATAAATCATCATCAGTGGATTGGAGCTCAAGATTTCGCATTATTACTGGTATAGCTAGAGGGCTACTTTATCTCCACGAAGAGGCCCCTCATAGAATAATTCATAGAGACATCAAAGCTAGTAACATTTTGCTGGATGAGAAATTAAATCCTAAAATTGCGGATTTTGGCTTGGCAAGACTATTCCCTGAAGATGATACCCACATGAATACTTTGAAGATTTCTGGCACTTATGGTTACATTGCGCCTGAATATGCTGTTCGTGGATATCTATCTGTCAAAACAGACATCTTCAGCTACGGGGTACTGGTGCTTGAAATAGTTAGTGGGCGAAAGAATCACGATGATAGACTTGGTGGGGAAAAGGCAAACCTCTTGAGCTATACATGGAAGTTGTATCAAAAAGGGAAACTTTTGGAGTTGGTTGACTCGAGTCTTTCAAAATGCAATCCAGATGAGGCAGCCATGTGCATTCAACTTGGTTTATTATGCTGTCAAGCTTCAGTAGCTGATAGACCTGACATGAATGCTGTTAATCTCATCCTTTCAAGTGATTCATTTACTTTGCCAAGAATGGGTAGACCAGGACTACAAGTTCATGGAGGAAAGTCGACAACAAGCACATCTTCATGTTTCACTCATTCCAATCCTACAATGAGTAGTGGATTAACCAAGGGATCTGCAAGCAGTAGTTTTATTGAGGATTACTCTAGAAATTCCATCTCCTGTTCCTCCATAAATGAAGGGAGATGA 1188 0.4175 MVVAAEALRFLANLCPCFEKRVRAARVGNDSSKDAVETDTWDLFFDLNTMQLATNFFSELNKLGHGGFGPVFKGLMPGGQEVAVKKLSLDSRQGVREFTNEVKLLLKLQHKNLVTLLGCCVEGPEKMLVYEYLPNKSLDYFIFDKHKSSSVDWSSRFRIITGIARGLLYLHEEAPHRIIHRDIKASNILLDEKLNPKIADFGLARLFPEDDTHMNTLKISGTYGYIAPEYAVRGYLSVKTDIFSYGVLVLEIVSGRKNHDDRLGGEKANLLSYTWKLYQKGKLLELVDSSLSKCNPDEAAMCIQLGLLCCQASVADRPDMNAVNLILSSDSFTLPRMGRPGLQVHGGKSTTSTSSCFTHSNPTMSSGLTKGSASSSFIEDYSRNSISCSSINEGR* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01072 395 CDD STKc_IRAK 63 323 - -
Pte5g01072 395 SMART serkin_6 57 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01072 395 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 365 - -
Pte5g01072 395 FunFam Cysteine-rich receptor-like protein kinase 41 133 333 - -
Pte5g01072 395 Gene3D Phosphorylase Kinase; domain 1 19 132 - -
Pte5g01072 395 Pfam Protein tyrosine and serine/threonine kinase 60 323 IPR001245 GO:0004672|GO:0006468
Pte5g01072 395 SUPERFAMILY Protein kinase-like (PK-like) 41 324 IPR011009 -
Pte5g01072 395 ProSiteProfiles Protein kinase domain profile. 57 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01072 395 Gene3D Transferase(Phosphotransferase) domain 1 133 332 - -
Pte5g01072 395 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 21 132 - -
Pte5g01072 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01072 Pte-Chr5 31241495 31243432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01072 38 342 Receptor kinase-like Gene Family AT4G21410 53.074 7.88e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte5g01072 PK_Tyr_Ser-Thr 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01072 - - rcu:8277657 588.186