Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01071 ATGGGACTAAGGAGAAGGAGACTAAAGGAAGGAGGCGACCTGAGAGTCGAGAGAGAGTTTGAGAGTTCAAGAAAAGTCTACGAAAGTGAGAACCTTTGCTCTCTCCAGTTGGCAGCAACAGCAACTCCCCCAGGTCTTTCTGAATATTCCCTCTCCTTAAGTTTTGTTACGATGTACACTTCAAGACAAAAAATCCGCAAAGACAAAGATGCTGAGCCAACTGAATTTGAAGAATCCGTTGGACAGGCACTATTTGATCTTGAAAACACTAACCAAGAGCTGAAAAGCGACTTGAAAGACCTGTACATCAATTCAGCACTTCAAGTTGATGTTAGTGGAAACCGCAAGGCTGTAGTCATCCATGTTCCCTACAGATTGAGGAAAGCTTTCAGGAAGATTCATGTCAGGCTTGTAAGAGAACTTGAGAAGAAATTCAGTGGCAAGGATGTTGTCCTTATCGCAACAAGAAGAATAGTGAGGCCTCCAAAGAAAGGTTCTGCTGTTCAACGTCCTCGCAGCAGAACTCTCACTGCTGTGCATGAGGCCATGCTGGAAGATGTTGTATTACCTGCTGAAATTGTTGGGAAGCGCACTAGATATCGAATTGATGGAACCAAGATAATGAAGGTTTTCCTGGATCCTAAAGAAAGGAACAATACAGAGTACAAGCTTGAGACTTTTTCTGCAGTTTACAGGAAGCTTTCCGGCAAAGATGTTGTATTTGAATACCCCATTACTGAAGCTTAA 747 0.4297 MGLRRRRLKEGGDLRVEREFESSRKVYESENLCSLQLAATATPPGLSEYSLSLSFVTMYTSRQKIRKDKDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSALQVDVSGNRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHEAMLEDVVLPAEIVGKRTRYRIDGTKIMKVFLDPKERNNTEYKLETFSAVYRKLSGKDVVFEYPITEA* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01071 248 Coils Coil 84 104 - -
Pte5g01071 248 ProSitePatterns Ribosomal protein S7e signature. 136 149 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pte5g01071 248 Pfam Ribosomal protein S7e 64 243 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pte5g01071 248 PANTHER 40S RIBOSOMAL PROTEIN S7 58 247 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01071 Pte-Chr5 31236922 31240290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01071 58 249 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 80.208 1.54e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01071 K02993 - qsa:O6P43_008566 360.147