Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01051 ATGGCAAATCGACTGAAGGAGGACGAGAAGAATGAAAAAATTATACGGGGACTTCTTAAACTACCAGAAAATCGCAGATGTATCAATTGTGATAGCTTGGGGCCTCAGTATGTATGCACAAATTTCTGGACATTTGTTTGCACAAACTGTAGTGGAATCCACCGGGAATTCACACACCGGGTAAAATCAATTTCCATGGCTAAATTTACCTCCCAAGAAGTTAATGCTCTTCAAGAAGGTGGGAATCAGCGTGCAAAGGATATATATTTTAAAGAATGGGATCCACAGAGAAATTCTCTGCCTGCTAGCAGTAATATTGAAAGGCTACGGGATTTTATTAGGCATGTTTATGTGGATAGAAGATATACTGGCGAGAGGAACTATGATAAGCCACCAAGAGGAAAGATGGGTGAGAAGGAAGAGATTTCTGAAAAAGGTACTCGTAGCCCACCACCTCACGAGGACGCATACGATCACCGTGGTGGAAGAAGTTTTGATGAAAGAAGAAGCCCTGGAAATGAACAGGAGGCTAGAAAGTTTGGTGCCTACAGAAGAAGTCCGAGTGAGCCTCAGATAATCAATGATTGGCGCCGTGAAGATAGATTTGGGAACGGAAGAAGATTTGAAGATCGTAGATCATCTGATCGAGATTATAAGTCAGAAGGACAATCACCTGAACAGGCAAAGGATCTGGATTCCTCAAGTCCTCCTGTGATAAGGCCCGTTAGAGATATTTTGGGGGATAATGTCATACCTCTCCGTATAAATGAACCTCCAAAAACAAATGTTGGAAAGACTGCTGATGTCTCCATGAACACAGTGAGAACTGCACCTTCCAGTAGTTTTGGTTCTACAACTGGTACTAAGGAAGAAGTTAAATTAGAGAGCACAGGAAGCCTTATTGATTTTGATGTAGACCCTGAACCAACTACTGCCACAGTACCTCAAGTGCAACTGAATTCTGTGGCCCCACCTATGACTCAGCCAGCCAATGCTGCTAATGACAACAACTGGGCCTCTTTTGATTTTGCCCCCAAGTCAAAAGTTCCTCTAGCTTCTCCAAATGCAAATACACTGGATTCGGTACTCTCACAACTGTCATCACCTGCTCCAGTGTATGGTAATAGTTTGGTAAGCCAAAGTGGTTCCAACATTTCGGCAGCTCCTTCTGCGGTGGGTTTGGCGTCAATACCTGCATCTGGCAGCTTAGCTTTTCAGACTGCAGGCCAAGTGCCAGCATCATCCTTCCCTTCCACTGTTGGTCCCATTGCATCAGCAAGTGGCTTTTCAACAGTGCTTCCGCCTAATCCTGGCTTGGTGGCTGTGGCTCCAAATGTAGTGCAGCCCCAGCAATCTGGTAATCAGCCTTCTGCACAGCATATGATGCTGACAAGTGCTGGAGCTTCTGTTAATCAGGGTTGGAGTGCACCTTTCGCCCCTGTTACTCAAGTCCCTTTAGGCGGACCAATTCCACAATCATCACATGTTGTTTCTCCATCTGCGCTGGATACGACATCAGGCACTTTCTCTCAATCTCCTGCTCCAGAAGTAAAATCAAGCGGTAGAAAAGCACTTCCAGAGGATCTTTTTACCACTTCATTTTCCCCTTTCCCTGCATCAGTTCCAGGATGGAATATGGGTCCACCTCATGGCATGGTCTACTACCCTATGCAGTATAACATGCCTGCTCCAAATGTTCTGCAGTCATCAAAATCAGCAAATCCATTTGATTCCAGTGGCGAAACACATTTTGTTCAGGCACCAACATTCCCTTCTATGTCATCTTTACAAGGTGCTTTGCCAAATTTGTTGCCCCCATCAGCTGGCTTAATGCACACTCCAAGCATGGGTACTCTGGCACCTACCTGGATGCCTCAACAACCATCAGCATTTGGGTCAGCACTGCCCCTCCAAGTCCCTTCTCATTCTTTTGCAATGGCTCCAGGGGCGTATGTTGGACAAGTACCAACTAACGTGTCACATACTGGGTATCAAGGAGCTGGTGGTTTTGGCCCTTCAAATCCAGACCAGCTGCTAGCAGCTAGATATCCAGCACCTGCTGCTCCAAGTCCTTTCTCTTCTTCCGGAGGGAACCCTTTTGGATGA 2106 0.4592 MANRLKEDEKNEKIIRGLLKLPENRRCINCDSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVNALQEGGNQRAKDIYFKEWDPQRNSLPASSNIERLRDFIRHVYVDRRYTGERNYDKPPRGKMGEKEEISEKGTRSPPPHEDAYDHRGGRSFDERRSPGNEQEARKFGAYRRSPSEPQIINDWRREDRFGNGRRFEDRRSSDRDYKSEGQSPEQAKDLDSSSPPVIRPVRDILGDNVIPLRINEPPKTNVGKTADVSMNTVRTAPSSSFGSTTGTKEEVKLESTGSLIDFDVDPEPTTATVPQVQLNSVAPPMTQPANAANDNNWASFDFAPKSKVPLASPNANTLDSVLSQLSSPAPVYGNSLVSQSGSNISAAPSAVGLASIPASGSLAFQTAGQVPASSFPSTVGPIASASGFSTVLPPNPGLVAVAPNVVQPQQSGNQPSAQHMMLTSAGASVNQGWSAPFAPVTQVPLGGPIPQSSHVVSPSALDTTSGTFSQSPAPEVKSSGRKALPEDLFTTSFSPFPASVPGWNMGPPHGMVYYPMQYNMPAPNVLQSSKSANPFDSSGETHFVQAPTFPSMSSLQGALPNLLPPSAGLMHTPSMGTLAPTWMPQQPSAFGSALPLQVPSHSFAMAPGAYVGQVPTNVSHTGYQGAGGFGPSNPDQLLAARYPAPAAPSPFSSSGGNPFG* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01051 701 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Pte5g01051 701 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Pte5g01051 701 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Pte5g01051 701 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Pte5g01051 701 MobiDBLite consensus disorder prediction 191 226 - -
Pte5g01051 701 MobiDBLite consensus disorder prediction 494 517 - -
Pte5g01051 701 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Pte5g01051 701 PANTHER ARFGAP/RECO-RELATED 1 701 IPR044820 GO:0005096
Pte5g01051 701 MobiDBLite consensus disorder prediction 124 241 - -
Pte5g01051 701 CDD ArfGap_AGFG 12 122 - -
Pte5g01051 701 MobiDBLite consensus disorder prediction 494 521 - -
Pte5g01051 701 MobiDBLite consensus disorder prediction 124 183 - -
Pte5g01051 701 MobiDBLite consensus disorder prediction 666 701 - -
Pte5g01051 701 Gene3D Arf GTPase activating protein 1 131 IPR038508 -
Pte5g01051 701 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Pte5g01051 701 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Pte5g01051 701 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01051 Pte-Chr5 30981523 30989487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01051 15 117 C2H2 Transcription Factor Family AT4G05330 35.780 5.99e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01051 - - tcc:18588634 722.62