Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01045 ATGTTCGGAAGGGCACCTAAGAAAAGTGATAACACCAGGTACTACGAGATATTGGGGGTTTCTAAGAACGCTAGTCCCGATGATCTCAAGAAGGCTTACAAGAAGGCTGCCATAAAAAACCATCCTGATAAGGGTGGAGATCCTGAGAAGGGATTAGTGATTTTTTTAAAGGAGAAATATGATTTTTATGTTGGATTTACTGGGGCTTCAGTATCGATCGTTATGTATGGATCTAGTTTTATGAGTTCCAGCTAA 255 0.4 MFGRAPKKSDNTRYYEILGVSKNASPDDLKKAYKKAAIKNHPDKGGDPEKGLVIFLKEKYDFYVGFTGASVSIVMYGSSFMSSS* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01045 84 SMART dnaj_3 12 61 IPR001623 -
Pte5g01045 84 Pfam DnaJ domain 14 49 IPR001623 -
Pte5g01045 84 PRINTS DnaJ domain signature 15 33 IPR001623 -
Pte5g01045 84 PRINTS DnaJ domain signature 33 48 IPR001623 -
Pte5g01045 84 SUPERFAMILY Chaperone J-domain 8 54 IPR036869 -
Pte5g01045 84 Gene3D DnaJ domain 4 62 IPR036869 -
Pte5g01045 84 ProSiteProfiles dnaJ domain profile. 13 71 IPR001623 -
Pte5g01045 84 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 5 47 IPR044620 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01045 Pte-Chr5 30771134 30771483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01045 8 44 C2H2 Transcription Factor Family AT1G74250 43.243 6.78e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01045 K09503 - ming:122085733 106.301