Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01042 ATGGTTTCCAACCAAAATCTCAACACAGTGAGTTTCACTGCTCCAAGAAGCTTTGTACAGAAATTCAAATCTCATGTGAAAGAAACCCTTTTCCCAGACGATCCGTTCAGACAGTTTAGAAATGAAAAACAAGCACTTGGCAAGGTCATCAAAGGCATTAAGTACTTCATGCCAATCTTTGAATGGCTGCCAAAATACAATCTACGTTTGTTTCGATACGATATTCTTGCTGGACTCACCATCACCAGCCTCGCCATCCCTCAAGGCATCAGCTATGCCAAACTCGCAGGCATTCCTCCCATCATTGGCCTGTATTCAAGCTTTGTCCCACCTCTTGTGTATTCGGTTTTCGGGAGTTCAAAGCACATGGCGGTGGGGGTAGTAGCTGCGTGTTCATTACTGATACATACAACGATGTCCAAGGTGGTGGACCCTGTGAAAGAGCCAGACTTGTATCTCCATCTGGTTTTCACTGCCACGTTTGTCACAGGAGTCTTCCAGGCTGCTTTGGGATTCCTAAGGTTGGGACTATTGGTGGAGTTTCTATCACATGCAACAATCACTGGCTTCATGGGAGGGACAGCAGTGATTCTGTGTTTGCAACAGTTGAAAGGAGTTTTTGGATTAGTGCACTTTACCACTAACACAGATGTCATATCCGTGATGAAGGCAATTGTTCATAATAGACACGAGGTCAAGTGGCAGAGTACAGTTTTAGGTGTAATCTTTCTTGCTTTTCTCCTATTCACCAGGTTCTTGAGGAAAAAGAATAGGAAGCTGTTCTTTATGTCGGCAATGACTCCTTTGATGGTCGTCGTAGTTGGCAGTGTCTTTGCTTACGTTGTCCATGGTTCTAAACATGGAATCCAAATTGTGGGCCACTTGCACAAAGGATTAAACCCTCTTTCCATTAAACACTTCAACTTCAACTCCAACTATATGTCAGCAGTGCTCAAAACTGGAATCATTACTGCCTTTTTATCATTAGCAGAAGGAATAGCAATAGGTAGGAGCTTGGCTGTAATGGAAAATGAACAAATTGATGGCAACAAGGAGATGATGTCATTTGGACTAATGAACATTATTGGTTCTTGCACTTCTTGCTACTTGACTACTGGTCCATTTTCTAAATCAGCAGTCAACTATGCTGCTGGCTGTAAAACTGCAATGTCCAACATAGTGCAAGCTGTCTTCATGGCACTTACACTCCTTTTCTTGGCACCCCTTTTCAGTTACACTCCTCTTGTAGCTCTATCAGCCATTATCATATCTGCCATGTTAGGGCTCATCAAATATGAAGAGGCTCACCACCTATTCAAAGCTGACAAGTTTGATTTCGTCATATGCATCACCTGCTTCCTTGGTGTCAGTTTTGTTAGTATGGATGTCGGACTCATGTTATCAGTGGGATTGGGCATAATAAGGTCACTTCTCTATGTGGCTAGACCACCAACCTGCAAGCTTGGAAAATTACCAAACTCTAGTCTGTATCGTGATGTAGAACAATATCCAGGTGCAACTGAAATCCCAGGAATCTTAATCCTTCAACTTGGCTCCCCCATATACTTTGCTACTTCCACATACATTAAAGAAAGGATTAGGAGATGGGTTGAAGATGAACAGGATAATTCAAAGACTGTTCAGCATATCTTACTAGACTTGACAGCTGTGACATCCATTGATGTGACTGGAATGGAGGCATTACTGGAGTTACGAAGGAGCTTGGAAGCAAATGGGATCAAGATGGCATTCATAAACCCAAGGTTTCAGATTATGGAGAAAATGGTGACATCTAAATTTGTAGACAAGGTGGGAAAAGAGAGTTTCTACTTGAACATGGAAGATGCAGTGGAGGCATGCCAATATCCCAATTCCAAAACAAACCTTACAGAGGACTCACACCAGTCTAACTCCAATCATGATGACCATTGA 1932 0.4249 MVSNQNLNTVSFTAPRSFVQKFKSHVKETLFPDDPFRQFRNEKQALGKVIKGIKYFMPIFEWLPKYNLRLFRYDILAGLTITSLAIPQGISYAKLAGIPPIIGLYSSFVPPLVYSVFGSSKHMAVGVVAACSLLIHTTMSKVVDPVKEPDLYLHLVFTATFVTGVFQAALGFLRLGLLVEFLSHATITGFMGGTAVILCLQQLKGVFGLVHFTTNTDVISVMKAIVHNRHEVKWQSTVLGVIFLAFLLFTRFLRKKNRKLFFMSAMTPLMVVVVGSVFAYVVHGSKHGIQIVGHLHKGLNPLSIKHFNFNSNYMSAVLKTGIITAFLSLAEGIAIGRSLAVMENEQIDGNKEMMSFGLMNIIGSCTSCYLTTGPFSKSAVNYAAGCKTAMSNIVQAVFMALTLLFLAPLFSYTPLVALSAIIISAMLGLIKYEEAHHLFKADKFDFVICITCFLGVSFVSMDVGLMLSVGLGIIRSLLYVARPPTCKLGKLPNSSLYRDVEQYPGATEIPGILILQLGSPIYFATSTYIKERIRRWVEDEQDNSKTVQHILLDLTAVTSIDVTGMEALLELRRSLEANGIKMAFINPRFQIMEKMVTSKFVDKVGKESFYLNMEDAVEACQYPNSKTNLTEDSHQSNSNHDDH* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01042 643 CDD STAS_SulP_like_sulfate_transporter 503 612 - -
Pte5g01042 643 NCBIfam sulfate permease 58 616 IPR001902 GO:0016020|GO:0055085
Pte5g01042 643 PANTHER SULFATE TRANSPORTER 17 624 IPR001902 GO:0016020|GO:0055085
Pte5g01042 643 SUPERFAMILY SpoIIaa-like 506 621 IPR036513 -
Pte5g01042 643 ProSiteProfiles STAS domain profile. 502 620 IPR002645 -
Pte5g01042 643 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271|GO:0008272
Pte5g01042 643 FunFam Sulfate transporter 31 482 623 - -
Pte5g01042 643 Gene3D STAS domain 482 624 IPR036513 -
Pte5g01042 643 Pfam STAS domain 503 616 IPR002645 -
Pte5g01042 643 Pfam Sulfate permease family 71 450 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01042 Pte-Chr5 30440276 30445021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01042 10 622 Inorganic Solute Cotransporters AT5G19600 64.169 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01042 K17471 - qsa:O6P43_007946 933.324