Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01040 ATGTCTGGAGTTCAAAGAAGAAATATAATTTTGAGATTTGCTGACTTGATTGATGAGAATGTGGAAGAGCTAGCAGCACTGGATGCCATGGATGCTGGTAAAGTATATTCCATGGGTAAATCAATAGACATTCCTCAAGGAGCAAACACTCTACGTTACTACGCGGGTGCTGCTGATAAAATCCATGGAGATGTGTTGAAAATGTCTCGTGAGCTTCAAGCATATACATTGAAAGAACCCATTGGTGTGGTAGGACACATTATTCCATGGAATTTTCCTTCCACTATGTTCCTCTGCAAGGTTGGCCCAGCCTTAGCAGCTGGCTGCACAATGATCGTCAAGCCTGCTGAGCAAACCCCTCTTTCTGCTTTGTTCTATGCTCATCTTGCCAAATTGGCTGGTATCCCAGATGGAGTACTGAATGTCATAACAGGTTATGGACCAACTGCTGGTGCAGCAATTAGCTTACATATGGACATAGATGCGGTCAGTTTTACTGGTTCTACTGAAGTGGGCAGAGAAGTCATGCAGGCTGCAGGGAGAAGCAATCTGAAATCGGTATCTCTCGAATTAGGAGGGAAGTCACCCCTTATAATTTTCGATGATGCCGATTTAGACAAAGCAACTGATCTTGCTCTCATTGGATTTTTATACAATAAGGGAGAAATCTGTGTGGCGAGTTCTCGTGTTTTTGTCCAGGAAGGTATCTATGACGAATTTGAGAAGAAATTGGCAGAGAAGGCCAAAGCTTGGACAGTTGGAGATCCATTTGATGCCAATGCTCGCCAAGGACCCCAGGTTGACAAGAAACAATTTGAGAAGATCCTTTCCTACATTGAGCATGGGAAGACAGAAGGAGCCACATTGTTGACCGGTGGTAAGCCAATTGGAAACAAGGGATATTACATCGAGCCTACCATCTTCACCAACGTTAAGGAGGATATGCTTATTGCTAAGGATGAAATATTTGGCCCTGTCTTGTCACTCATGAAGTTCAAGACTATGGAGGATGCAATCAAGAGTGCTAATAACACAAGATATGGGCTAGCTGCAGGAGTGATGACAAAGAACATTGATATAGCCAACACAGTTTCCAGGTCTATCCGTGCAGGAATCATTTGGGTCAACTGCTACTTTGCCTTTGACAATGACTGCCCATATGGAGGGTACAAGACAAGTGGGTTTGGAAGGGATTTTGGATTGCATGCCGTTGAAAAGTACATGCAACTTAAATCCGTTGTCACTCCTCTCTACAACTCCCCCTGGCTTTGA 1272 0.4387 MSGVQRRNIILRFADLIDENVEELAALDAMDAGKVYSMGKSIDIPQGANTLRYYAGAADKIHGDVLKMSRELQAYTLKEPIGVVGHIIPWNFPSTMFLCKVGPALAAGCTMIVKPAEQTPLSALFYAHLAKLAGIPDGVLNVITGYGPTAGAAISLHMDIDAVSFTGSTEVGREVMQAAGRSNLKSVSLELGGKSPLIIFDDADLDKATDLALIGFLYNKGEICVASSRVFVQEGIYDEFEKKLAEKAKAWTVGDPFDANARQGPQVDKKQFEKILSYIEHGKTEGATLLTGGKPIGNKGYYIEPTIFTNVKEDMLIAKDEIFGPVLSLMKFKTMEDAIKSANNTRYGLAAGVMTKNIDIANTVSRSIRAGIIWVNCYFAFDNDCPYGGYKTSGFGRDFGLHAVEKYMQLKSVVTPLYNSPWL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01040 423 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 411 IPR016162 GO:0016491
Pte5g01040 423 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 189 196 IPR029510 GO:0016491
Pte5g01040 423 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 217 228 IPR016160 GO:0016491
Pte5g01040 423 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 193 382 IPR016163 GO:0016620
Pte5g01040 423 FunFam Aldehyde dehydrogenase3 193 382 - -
Pte5g01040 423 Pfam Aldehyde dehydrogenase family 3 413 IPR015590 GO:0016491
Pte5g01040 423 SUPERFAMILY ALDH-like 2 419 IPR016161 GO:0016491
Pte5g01040 423 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 413 - -
Pte5g01040 423 FunFam Aldehyde dehydrogenase 1 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01040 Pte-Chr5 30425285 30429526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01040 1 424 Aldehyde Dehydrogenase Gene Family AT3G24503 73.176 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01040 K12355 - qsa:O6P43_004044 717.227