Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01039 ATGATGACTGAACTGGTAATAAACACAGATAGGGTGCAGAAATTCTTCGACGATATCGAAACTCAAAAAAACATTCTATCAAAATGTACGAACCTCTTTACAACTCTATCGAATCGCTTCACCTCCCTGCAAGAATCAATAGCTCTGAAATCTCAATCCCTCCAATACAAAATCCAAGCTTTGGAAGCCAATGCCCGCGAAACCCTTCAATCCCTTGACCACCGTGAGAACGCTATACCTGAGCGGGAGTCTGCAGCCGCTGCACTTGTTGAGGAGCAAAAGGAAACAGCTTTGGCTGAATTACAGAGACCCATTTCTGGTGATGCTGATTTATCTGAAACCCTCAAATCACTTTCTCGGAAAATGGATTCATCTGGATTGTTGAGGTTTATTGTTTCTAAGCGGAAAGAGTCGGTTACTTTGAGAACTGAGCTTCCATCTGCCATAGCTGAAGCGGTCGACCCGCCGAGGCTTGTGTTGGAGGCAGTCGGTTGTTTTTTGAATTGTAAATTGGAGAATTCTGGAGTGACTGATAAGAGATGGGCATGTGGAATTTTGATTCAGGCTCTGTTTCCAGATTATTGTTTTGATAACAAAGGTCCTGAATTTTCTAGAAGTATTGTGGATAGAGCAGCCGGGGTGCTGGATAAGTGGAAGGCGCAGATGGATAGAGATTCAGGGTGTGGATCATTGGTTGCGGCCGAAGTAGTGATGTTCTTGCAAATTGTGGTGGGTTTTCGATTGAAGGAAAGATTTGAAGAGCAGTACTTAAGTAAATTAGTCATGGAATTTGCAGGAAGGAGGGATATGGCAAAGCTTGCAGCTGCTCTTAAATTTGGAGAGAAAATGGGAGATATCATAGATGACTTGGTGAAGAATGGCAAAGGAATAGAAGCTGTGTATTTCGCTTCGGAATCTGGTTTGACAAAAAGCTTCAGTCCAATAAACTTACTAAAATCCTATCTCCAGAACTCCAAAAAAACTGCCTCTTCCCTTTTAAAGAAAGGAAACAACAGTCTTGCAGCAAAGGAGGAATCAACGAACATGGAACTGCATTCTATCAAATCCATTATCAAGTGTGTTGAAGACCACAACCTGGAATCTGAATTCAACCTTGAAAACTTGAGGAAGCGAGTTTCTAATCTGGAGAAAGTCAAAGCAGAAAGGAAGAAGAGTTCATCAGTCAGCAGTAAATCTCACAATAAGAGAGCCTCTGGCTCTAGTGGAGGCAGAGGCAGTGGACACTCCTTCCGTCCGGCCAAGGCAGCCAAATTTTCCAATGCTTACTCCTTCATACAGAGAAACGCAGTTCCTCCTCCACAACCTAGCCCTGCCAGGAGATATTCTGGACCATACAACTTCCCTGTCCAAACTGTATATGATATACCTGCTTCCAATCCATTTCCATCAAGCTATGCAGCAGCTATTAACCAGAGCCCCTCCTCAGTGACACCGCAGTACTCACTCTCTTCTGACAACATTGGATCTGCAAGTTACATGCCTGGTGCTTCTTATGCAGGCCATGCCAGCTACGTTCCTTATGATTATGGATCTGCTGCTGCAGGTAGTTACCAACCACCATCTTATGGACAGTGA 1596 0.438 MMTELVINTDRVQKFFDDIETQKNILSKCTNLFTTLSNRFTSLQESIALKSQSLQYKIQALEANARETLQSLDHRENAIPERESAAAALVEEQKETALAELQRPISGDADLSETLKSLSRKMDSSGLLRFIVSKRKESVTLRTELPSAIAEAVDPPRLVLEAVGCFLNCKLENSGVTDKRWACGILIQALFPDYCFDNKGPEFSRSIVDRAAGVLDKWKAQMDRDSGCGSLVAAEVVMFLQIVVGFRLKERFEEQYLSKLVMEFAGRRDMAKLAAALKFGEKMGDIIDDLVKNGKGIEAVYFASESGLTKSFSPINLLKSYLQNSKKTASSLLKKGNNSLAAKEESTNMELHSIKSIIKCVEDHNLESEFNLENLRKRVSNLEKVKAERKKSSSVSSKSHNKRASGSSGGRGSGHSFRPAKAAKFSNAYSFIQRNAVPPPQPSPARRYSGPYNFPVQTVYDIPASNPFPSSYAAAINQSPSSVTPQYSLSSDNIGSASYMPGASYAGHASYVPYDYGSAAAGSYQPPSYGQ* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01039 531 Coils Coil 365 392 - -
Pte5g01039 531 Pfam Frigida-like protein 110 393 IPR012474 -
Pte5g01039 531 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 8 407 - -
Pte5g01039 531 MobiDBLite consensus disorder prediction 398 412 - -
Pte5g01039 531 MobiDBLite consensus disorder prediction 384 418 - -
Pte5g01039 531 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01039 Pte-Chr5 30385939 30389833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01039 302 464 EXO70 exocyst subunit family AT4G31540 26.012 3.50e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01039 - - qsa:O6P43_007940 706.442