Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01036 ATGATGTTGTTACTGCAACTGTTTGTAACTGTGGTCCTGTTATTAGGTAGTAAACCTGAGGAGTCAAAGGCTCAATCAGATTCCTTATCTCAAATGGGAAAGGCAGGTGCTGTTCTCATGGTCTACAGATCATGTGGGAAGAAGGGTGACCATTTGACTTCAAGGTGTCCCTACAAGGATCTTGCCCAACCTGTTGAGTCATTCATTGACAAGCTTGCTACTGCAGAAGCTACTGCTTCAGGTACAACTAAGGGTGCATATGTTCCTTCTGGCATGAGAGGTGGTGGTACTGAGAGGACTGGATCCGAAATGCAATGCAGGAATGATGAAAACTCTGTGCGTGTCACTAATCTCTCGGAGGACACGCGGGAGCCTGATGTCCTGAAACTCTTCCGGCCTTTTGGTGTTGTGAGTAGAGTATATGTTGTTATTGATCAGAAAACTGGCATGAGCAGAGGTTCGCTCAAAACTATCAGAAAAAGATATAAACTTTCCTTTTAG 501 0.4451 MMLLLQLFVTVVLLLGSKPEESKAQSDSLSQMGKAGAVLMVYRSCGKKGDHLTSRCPYKDLAQPVESFIDKLATAEATASGTTKGAYVPSGMRGGGTERTGSEMQCRNDENSVRVTNLSEDTREPDVLKLFRPFGVVSRVYVVIDQKTGMSRGSLKTIRKRYKLSF* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01036 166 Pfam Eukaryotic translation initiation factor 3 subunit G 12 61 IPR024675 -
Pte5g01036 166 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 111 153 IPR000504 GO:0003723
Pte5g01036 166 Gene3D - 61 155 IPR012677 -
Pte5g01036 166 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 54 153 - -
Pte5g01036 166 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 113 153 IPR000504 GO:0003723
Pte5g01036 166 MobiDBLite consensus disorder prediction 84 110 - -
Pte5g01036 166 SUPERFAMILY RNA-binding domain, RBD 89 153 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01036 Pte-Chr5 30350295 30350795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01036 5 153 Eukaryotic Initiation Factors Gene Family AT3G11400 62.338 1.28e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01036 K03248 - qsa:O6P43_028180 212.616