Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01035 ATGAAGTCCATCGATAATGATAACTCTGACTCTAACAACCATAGTAACTGGTTGGGTTTTTGTCTTTCACCTCAAATGATCATGGATGTTCCTTCAAACCCTCATGAGTTACAATCTCCTGCTTCTGCTTCCTCTGAACCAGCAAGCATTTTACACTGTCAACCTTATGGAATGAACTGTGGAGTGTACTATGGAGTTGCAGGTGATAATGGTAGTAGCTTGTATTCCCCTTTGTCTATGATGCCTGTCAAATCTGATGGCTCTCTTTGCTTAATGGAAGCTCTTGGCAAGTCAAGGTCACAAGGGATGGTAGCAACTTCGACTCCAAAACTAGAGGATTTCTTTGGTGGGGGTGCTATGGTCACCCATCAGTATGAATGCAATGCTAGAGACGCCATGGCTTTGAGCTTAGACAGCATGATTTACAACAATCAATCCCCACATTGTGAACAGGAAAGCCAAAAGTGCCTGAGCCAACTTCAGCATAATACTAGAAACCAAGAAGAACAAGAGCACTTCGCTTACTACTCTGGATACAGAACCCATGGTATGATGTTGGACGCAGCTAAGCAAAACCATATTTCTGACTGCAACCTCCAGCTCCCAACAATGGCGGAGAATGATATACCTGCTATGAAAAGCTGGGTGTTAAGGAACGGCACTGCTAACCATACAGAACAGAGAATTGTTGGAGTAGCAGAAGAGAGTGGAGCTGATTCTGCATCTCTTGGTGCAATTGCACATGGAGATTTGCAGACATTAAGCTTGTCTGTAAGCCCTGGTTCCCAATCAAGCTGTGTGACTAACTTACAGCAGACATCTGCTACTGTCACTGATATTGTCGTTGCTGATTCAAAGAAAAGGGGATCTGGGAAGTTGGAACAGAAGAAAATTGTTCATAGGAAATCATTGGATACATTTGGTCAAAGAACCTCTCAGTATAGAGGTGTCACAAGGCATAGATGGACGGGTAGATATGAAGCTCATCTATGGGATAACAGTTGCAAGAAAGAAGGCCAAAGCAGGAAAGGGAGGCAAGTTTATCTAGGTGGTTATGATGTGGAAGAAAAAGCTGCAAGAGCTTACGATCTGGCTGCACTCAAGTATTGGGGTCCCTCCACCCATATCAATTTCCCATTGGAAAATTACCAAAACCAACTTGAAGAGATGAAGAACATGACTAGACAAGAATATGTTGCTCATTTGCGAAGAAAAAGCAGTGGATTCTCAAGAGGTGCTTCCATGTACAGAGGAGTGACAAGCAGACATCATCAACATGGACGATGGCAAGCTCGGATTGGCAGGGTGGCCGGAAACAAAGATCTTTATCTTGGAACATTTAGCACCCAAGAGGAAGCAGCTGAAGCCTATGACATTGCAGCAATAAAATTTCGTGGGTTAAATGCAGTGACCAATTTTGATATAACAAGGTATAACGTTGAGAAGATTATGGAAAGCAGTACCCTTCTTGCTGGTGAACTGGCTAGGCGAAACAAGGAGCCTGTGTCGCAGAACGATGCAGCTTTAACGCAGTATAGTCATGCAGATGGTAATGCCAAAGAGATCATGTTTTCAGAGAACAACAACGGATGCAAGTCAGACTGGAAAATGGTTCTTTATCAGTCCTCCTCCCAACAAATTGATCAGAAGCAATTGAATCTCGATACTTATGGAGGTTATTCCTTCTCTTTAGGTACAGATAGTACTAGTCATCATGAGGTAGAGGAGTCAGCTAATTTGGTTGGTCACTTTTCCAATGCCTCTTCATTGATCACTAGCTTGAGCAGCTCAAGGGAGGGGAGTCCTGATAAAGGAAGTTTGCCAATGCTGCTTGGAATACAAGGAACAGAGTCCAAGTTATATGCCAGTCCTAGTAGTAGCATGAACCACTGGCCTTCAGCTGCTGCAGCTCAATTGAGGCCTCCACTTTCATTGCCTCAGGTTCCGGTATTTGCTGCTTGGACAGATGCATAG 1974 0.4372 MKSIDNDNSDSNNHSNWLGFCLSPQMIMDVPSNPHELQSPASASSEPASILHCQPYGMNCGVYYGVAGDNGSSLYSPLSMMPVKSDGSLCLMEALGKSRSQGMVATSTPKLEDFFGGGAMVTHQYECNARDAMALSLDSMIYNNQSPHCEQESQKCLSQLQHNTRNQEEQEHFAYYSGYRTHGMMLDAAKQNHISDCNLQLPTMAENDIPAMKSWVLRNGTANHTEQRIVGVAEESGADSASLGAIAHGDLQTLSLSVSPGSQSSCVTNLQQTSATVTDIVVADSKKRGSGKLEQKKIVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDVEEKAARAYDLAALKYWGPSTHINFPLENYQNQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDITRYNVEKIMESSTLLAGELARRNKEPVSQNDAALTQYSHADGNAKEIMFSENNNGCKSDWKMVLYQSSSQQIDQKQLNLDTYGGYSFSLGTDSTSHHEVEESANLVGHFSNASSLITSLSSSREGSPDKGSLPMLLGIQGTESKLYASPSSSMNHWPSAAAAQLRPPLSLPQVPVFAAWTDA* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01035 657 Gene3D AP2/ERF domain 312 381 IPR036955 GO:0003700|GO:0006355
Pte5g01035 657 Gene3D AP2/ERF domain 415 476 IPR036955 GO:0003700|GO:0006355
Pte5g01035 657 ProSiteProfiles AP2/ERF domain profile. 415 474 IPR001471 GO:0003700|GO:0006355
Pte5g01035 657 CDD AP2 414 476 IPR001471 GO:0003700|GO:0006355
Pte5g01035 657 CDD AP2 312 379 IPR001471 GO:0003700|GO:0006355
Pte5g01035 657 SMART rav1_2 313 385 IPR001471 GO:0003700|GO:0006355
Pte5g01035 657 SMART rav1_2 415 480 IPR001471 GO:0003700|GO:0006355
Pte5g01035 657 FunFam AP2-like ethylene-responsive transcription factor ANT 312 381 - -
Pte5g01035 657 SUPERFAMILY DNA-binding domain 312 381 IPR016177 GO:0003677
Pte5g01035 657 ProSiteProfiles AP2/ERF domain profile. 313 379 IPR001471 GO:0003700|GO:0006355
Pte5g01035 657 Pfam AP2 domain 313 371 IPR001471 GO:0003700|GO:0006355
Pte5g01035 657 Pfam AP2 domain 416 466 IPR001471 GO:0003700|GO:0006355
Pte5g01035 657 FunFam AP2-like ethylene-responsive transcription factor 414 476 - -
Pte5g01035 657 PRINTS Ethylene responsive element binding protein signature 456 476 IPR001471 GO:0003700|GO:0006355
Pte5g01035 657 PRINTS Ethylene responsive element binding protein signature 314 325 IPR001471 GO:0003700|GO:0006355
Pte5g01035 657 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 107 550 - -
Pte5g01035 657 SUPERFAMILY DNA-binding domain 414 475 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01035 Pte-Chr5 30331045 30335444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01035 254 496 AP2-EREBP Transcription Factor Family AT1G72570 73.770 4.17e-122 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte5g01035 AP2 7.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01035 K09285 - qsu:112030198 811.216