Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01033 ATGTCAACTTCGCCTTCTCCGGGAGCTGCTCCAGCTCCCACATCACCACCGGCGCCCCCTGCCGACAGTACGGCACCTCCTCCGTCAACAACAACTCCGCCTTCGGTGGCTCCGTCTTCGCCACCTCCGTCGAATCCGTCTCCGCCTTCTCCTTCATCTTCGTCTCCGGCCCCTACAGTTCCAGATACTCCTTCAGCTCCTCCACCTACGAATGCTATATCTCCTTCTCCACCTGCGTCCACCCCACCTTCTACCACTCCATCTACGCCGTCGGTTCCGTCACCGGTGCTGCCATCCACTCCGAACACTCCCCCCGCGCCTGCTGGTCGAGGATCACCACCGCCTCCCAGTTCGAAAACGCCTTCTACTCCCAGTCGTGGTTCCCCATCACCCCCTTCGCCTTCTTCCAAGTCGTCTTCTTCGTCGGGTGTGTCTATTGGGCTTGTGGTGGGAGTCGCGGTGGGTGCAGTTGCGATACTATTGGTGCTTAGTATTGTCTGCATTTGCTGTAGAAAGAAGAGGAGAAGACGCGATGAGGAGTACTACATGCCTCCGCCACCACCTGTGGGTGCTGGACGTAAAGATGACCGTTATAGCGGTGCGCCTCAGCATTGGCAACAAAGTGCTAACCCTCCTTCAGATCATGTTGTGATGATGCCACCAAAGCCATCTCCTCCGTCCTACTCTCCTTTGTATGCTCCTAAGCCTCCTCCTCTTCCTTCACCAGCACCAGCATCAGCACCAGCATCAGCACCAACATCATTACCTTACCTAAACAGCAGTGGAGGTTCTGGCACAAATTATTCAGGATCTGAAACTCCTTTACCACCTCCCTCTCCTGGCATTGCCCTGGGTTTCTCAAAGAGCACATTCACATATGACGAATTGGCTAGGGCAACAGATGGATTTTCTGATGCCAACCTCTTAGGTAGTGGTGGCTTTGGGCATGTGCACCGAGGAATTCTGCCAAATGGTAAGGAAGTAGCTGTCAAGCAGCTGAAGTCTGGGAGCGGGCAGGGTGAGCGTGAATTTCAGGCTGAAGTCGAGATTATTAGTCGAGTGCATCACAAACATCTCGTCTCGTTGGTGGGTTACTGTATGACTGGAACTAAGAGGCTTCTTGTATATGAGTTTGTTCCAAACAACACTTTGGAGTTCCATTTACATGGAAAGGGAAGACCAGTTTTGGAATGGCCTACAAGACTGAAAATTGCTTTAGGATCTGCAAAAGGATTAGCATATCTTCATGAGGATTGCCATCCCAAAATTATTCACCGAGATATCAAGGCTGCGAACATACTTCTGGATTTCAAGTTTGATGCTATGGTTGCAGATTTTGGACTGGCTAGGATTTCTTCTGATTTCAATACACATGTCTCTACTCGTGTAATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCAAGTGGGAAACTTACAGACAAGTCAGATGTGTTCTCCTTTGGGGTTGTGCTTCTGGAATTGATTACTGGTCGCCGTCCTGTTGATTCAAGTAATACTTTCATGGACGACAGTTTGGTGGACTGGGCAAGGCCATTGCTCACCCAAGCTTTAGAAGATCGAAATTTTGATGCTTTAGTGGATCCAAAGCTGCAACATGACTATGACCACAATGAGATGGGTAGGATGGTGGCCTGTGCAGCAGCTTGTGTAAGACATTCAGCACGACGTCGACCACGGATGAGCCAGGTGGTTCGGGCTTTGGAAGGAGATGTTTCTCTGGCTGATCTAAACGAAGGAATTACACCTGGTCACAGTAGTGTTTATAGTTCTCATGGAAGCTCCGACTATGACACATCACAATACAAGGAAGACATGAAAAGGTTTAGAAAAATGGCGCTAGGAAGCCAAGGGTATGGTGCAAGTAGCGAGTACAGTGGCCCAACCAGTGAGTATGGGTTGTATCCTTCCGGTTCCAGCAGTGAAGGACAAACCACAAGGGAAATGGACATGAGGAAGATGAAAAACAGTGAAGGTTTCAGCGCAAGCAGCCAAAAAAACACCGGAGACATGGAACTCGGAAGAATGAAAAATAGTCAAGGTTTCAGTGGAACTTCTTGA 2085 0.4964 MSTSPSPGAAPAPTSPPAPPADSTAPPPSTTTPPSVAPSSPPPSNPSPPSPSSSSPAPTVPDTPSAPPPTNAISPSPPASTPPSTTPSTPSVPSPVLPSTPNTPPAPAGRGSPPPPSSKTPSTPSRGSPSPPSPSSKSSSSSGVSIGLVVGVAVGAVAILLVLSIVCICCRKKRRRRDEEYYMPPPPPVGAGRKDDRYSGAPQHWQQSANPPSDHVVMMPPKPSPPSYSPLYAPKPPPLPSPAPASAPASAPTSLPYLNSSGGSGTNYSGSETPLPPPSPGIALGFSKSTFTYDELARATDGFSDANLLGSGGFGHVHRGILPNGKEVAVKQLKSGSGQGEREFQAEVEIISRVHHKHLVSLVGYCMTGTKRLLVYEFVPNNTLEFHLHGKGRPVLEWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFDAMVADFGLARISSDFNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVVLLELITGRRPVDSSNTFMDDSLVDWARPLLTQALEDRNFDALVDPKLQHDYDHNEMGRMVACAAACVRHSARRRPRMSQVVRALEGDVSLADLNEGITPGHSSVYSSHGSSDYDTSQYKEDMKRFRKMALGSQGYGASSEYSGPTSEYGLYPSGSSSEGQTTREMDMRKMKNSEGFSASSQKNTGDMELGRMKNSQGFSGTS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01033 694 MobiDBLite consensus disorder prediction 1 143 - -
Pte5g01033 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Pte5g01033 694 FunFam proline-rich receptor-like protein kinase PERK1 281 378 - -
Pte5g01033 694 Gene3D Transferase(Phosphotransferase) domain 1 379 586 - -
Pte5g01033 694 CDD STKc_IRAK 309 578 - -
Pte5g01033 694 MobiDBLite consensus disorder prediction 665 694 - -
Pte5g01033 694 MobiDBLite consensus disorder prediction 627 653 - -
Pte5g01033 694 MobiDBLite consensus disorder prediction 9 131 - -
Pte5g01033 694 Pfam Protein tyrosine and serine/threonine kinase 308 576 IPR001245 GO:0004672|GO:0006468
Pte5g01033 694 ProSiteProfiles Protein kinase domain profile. 303 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01033 694 MobiDBLite consensus disorder prediction 179 281 - -
Pte5g01033 694 SUPERFAMILY Protein kinase-like (PK-like) 279 576 IPR011009 -
Pte5g01033 694 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Pte5g01033 694 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 155 645 IPR047117 -
Pte5g01033 694 Gene3D Phosphorylase Kinase; domain 1 285 378 - -
Pte5g01033 694 SMART serkin_6 303 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01033 694 MobiDBLite consensus disorder prediction 252 272 - -
Pte5g01033 694 MobiDBLite consensus disorder prediction 625 694 - -
Pte5g01033 694 FunFam Proline-rich receptor-like protein kinase PERK1 379 587 - -
Pte5g01033 694 MobiDBLite consensus disorder prediction 216 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01033 Pte-Chr5 30304526 30309007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01033 122 638 Trihelix Transcription Factor Family AT1G70460 50.000 2.27e-165 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte5g01033 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01033 - - qsa:O6P43_007923 806.979