Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01028 ATGTCAGCCAAACTTGATTGCATTATTTCTGGGACTAATGCGTTTTCTGAAGCTGAGTTTCGAATTAACTGCCTCCAGCAAAGGCTCCTTACTTGTGAACAATATACTGACAAGCTTGCCCTTGCAACAATGCGATGGAGTGAGAAGTTGCCAAGACTTTATTCACGTTACTTGTCACCATGTAACATTTTTTCTCGATACACCCTTGTTTGTTTTACATACAAGACTTCTGTCAAAGATGAGCTAACTGCTGCATTTTCTTGGTCAGTACCAACTGAGAAAGCAAGCATGGAAGATGTTAGGTACGACTCCAAGAAACTTGCTCAATGTTTAAAATATCTGCAGCGAATGAGTCTTGTATCTCAGCTAATGCTGCTGCTGCTAACTCTAGCAATATACTTTCTATATCAACTATTACGAGGTTTGAAATATGTGCACTCTGCCAATGTCTTGCACCGTGATCTTAAGCCGAGCAATTTGCTTGTCAATGCAAATTGTGACCTGAAAATTGCAGACTTTGGATTGGCTAGGACGACGTCGGAGACAGATTTCATGACCGAGTATGTTGTCACTCGTTGGTATCGAGCTCCAGAACTGCTCCTTAATTGTTCAGAATATACTGCAGCAATAGATGTTTGGTCTGTTGGTTGCATATTTGATGAAATTATGACAAGAGAACCTCTATTTCCTGGAAAGGATTATGTTCATCAGCTAAGACTCATAACAGAGTTAATTGGTTCGCCTGACGACACTAGCCTTCGATTTCTGCGAAGCGAGAATGCCAGGAGATATGTTAGACAGCTTCCTCAGTACAAGAAGCAAAGGTTCTCTGCTAAGTTCCCTAATATGTCCCCTGAGGCTTCAACTAGTCCACAACTCAGCAATCAAAACCACAGATTGATATCGGACAGAAGCAACAAAGCCCAGAATATCACAAATCGCAGACCAGGGACACGAGAAGCAGCAAACACACAAAAAAAATACAACAAGGACTAG 996 0.4147 MSAKLDCIISGTNAFSEAEFRINCLQQRLLTCEQYTDKLALATMRWSEKLPRLYSRYLSPCNIFSRYTLVCFTYKTSVKDELTAAFSWSVPTEKASMEDVRYDSKKLAQCLKYLQRMSLVSQLMLLLLTLAIYFLYQLLRGLKYVHSANVLHRDLKPSNLLVNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCIFDEIMTREPLFPGKDYVHQLRLITELIGSPDDTSLRFLRSENARRYVRQLPQYKKQRFSAKFPNMSPEASTSPQLSNQNHRLISDRSNKAQNITNRRPGTREAANTQKKYNKD* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01028 331 MobiDBLite consensus disorder prediction 281 319 - -
Pte5g01028 331 Pfam Protein kinase domain 104 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01028 331 FunFam Mitogen-activated protein kinase 121 308 - -
Pte5g01028 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Pte5g01028 331 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 131 282 - -
Pte5g01028 331 SMART serkin_6 67 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01028 331 SUPERFAMILY Protein kinase-like (PK-like) 100 287 IPR011009 -
Pte5g01028 331 ProSiteProfiles Protein kinase domain profile. 1 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01028 331 Gene3D Transferase(Phosphotransferase) domain 1 131 287 - -
Pte5g01028 331 MobiDBLite consensus disorder prediction 280 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01028 Pte-Chr5 30124196 30131745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01028 133 287 MAP Kinase Gene Family AT4G01370 87.742 1.40e-99 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pte5g01028 Pkinase 2.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01028 K20600 - gmx:100803024 298.901