Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01025 ATGGGGGAAGGCGAAGGAGGTGATTGTCATCCGAAGAATGTGCAATCAGGCACTGCTGTGATGGCGGTGGGGACATCGGAGGCGGCGGCGGCGGCTTTGCCTTCTGATATTCCAGCTAAAAGATTGGCGAGGCAACTTGATTTCACTGGATACGGTGGGGTGGCAGGGGGTGTAACTTCGCAAGAACAGCAGCAAAAGCAATCACAGCCACAGATTCAGACACAGCCGCAGTCTCAGGTACAGCTACGACCTCAGGTTCAGCTACAGCCTCTGTCTCCTATGATTCTGCAAAATCAGCAGCCAGGGCCACAAACACATCCACAACTTCAACTATCGACACTAACTCAGCAACAGGTGATGATGATGCCAATTGCAGCTCAAGTCGCACATCCTCCTGCAAGGGTTGGAAAACCAGAATCTCCAAAGTCAAGATCAAGGCCTAACTTCGATATGAAAGATGGAACTCCAAAAAAGCAAAAACAGTGTAATTGTAAACACTCAAAATGCTTAAAGTTATATTGTGAATGTTTTGCATCGGGGATATATTGTGACGGATGCAATTGTTCCAATTGTTGTAACAATGTTGAAAATGAAGCTGCTAGACGGGAAGCTGTCGAAGCTACCTTGGAGCGCAATCCAAATGCGTTTAGACCAAAAATTGCAAGTAGTCCTCATGGGACACGAGACAGTAGGGAAGAAGTCGGGGAGATTTTACTGTTGGGAAAGCACAACAAAGGATGCCACTGCAGGAAATCAGGATGTCTGAAAAAGTACTGTGAATGCTTCCAGGCCAACATTCTTTGCTCTGAGAATTGTAAATGCATAGACTGCAAGAATTATGAGGGAAGTGAAGAAAGACAGGCATTATTTCATGGAGATCAAAATAACATGACATATATTCAACAGGCAGCAAATGCTGCCATAACTGGAGCTATAGGATCCTCTGGATATACCTCTCCTCCAGCCAAGAGAAGAAAAGGACAGGAGCTCCTCTTTGGCTCCATGACAAAGGATCTGTCGGCACACAGGCTTGGTCCCTTTCAACAGGTAAACCATCCCAGACCTCCTGCACCCGCTTCATCTTTACCTTCGATGTCAGGGACTCGAGTTGGTGCACCTACATTGGGCGCACCGAAAGTTACATATAGATCTCTGTTAGCAGACATCATTCAGCCACAACACTTGAAGGAGATATGTTCCTATTTGGTGGTAATGTCAGACCAAGCTGCAAAGGCACTTGCAGATGAAAAAAATTCAAAGGAAAATCAGAGAGAATATAAAACAGAAGGTTCCCTTGCTTCTTCAATACAAGAGCAAGTGCTCAGCAGAAGAGATGCTGATGTTGACAAAACTGACACCACTAATTGTTCAAATTCAAACCAGGCAGATAAAATTAGTCCAGATGATTCCAGTTCAGATGGCATTGATGCCCAGAAGGCAAGGCCAGTGTCCCCTGTAACCTTAGCTTTGATGTGCCACGAACCAGAAACTATGTTCATGACAACAGCTTCCTCTAACGGCATGACAACGCATACCACGGAGACATCTTCACAGCTTCCAAATGGACAAGGCATAACAGAGGTTTATGCAGACCAAGAAAGACTTGTGTTAACAACATTTAGAGATTTCCTAAATAGGATGATCACAATGGGAGAAATAAATGAAACGAAGTGTTCTCCCATAGCAAGATGTGAAACAGATTCTCAAAAGGATGCCATCAATAATGGCCATAGGAGTGGCGGTTCTGGCACAATGTTCCAGGAGCACTCGAGCAATGATGTCGCAAAACCTGTTGTACAGCCATTGCCAATGACTACCAACATGATTCCTCTGGCAACTACGACGCAGGCAAACCTTGTTTCTGAAAATGGTGAAAGCAAGGTAAAGCATGAAAAGGGCACGTAG 1905 0.4509 MGEGEGGDCHPKNVQSGTAVMAVGTSEAAAAALPSDIPAKRLARQLDFTGYGGVAGGVTSQEQQQKQSQPQIQTQPQSQVQLRPQVQLQPLSPMILQNQQPGPQTHPQLQLSTLTQQQVMMMPIAAQVAHPPARVGKPESPKSRSRPNFDMKDGTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCSNCCNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEVGEILLLGKHNKGCHCRKSGCLKKYCECFQANILCSENCKCIDCKNYEGSEERQALFHGDQNNMTYIQQAANAAITGAIGSSGYTSPPAKRRKGQELLFGSMTKDLSAHRLGPFQQVNHPRPPAPASSLPSMSGTRVGAPTLGAPKVTYRSLLADIIQPQHLKEICSYLVVMSDQAAKALADEKNSKENQREYKTEGSLASSIQEQVLSRRDADVDKTDTTNCSNSNQADKISPDDSSSDGIDAQKARPVSPVTLALMCHEPETMFMTTASSNGMTTHTTETSSQLPNGQGITEVYADQERLVLTTFRDFLNRMITMGEINETKCSPIARCETDSQKDAINNGHRSGGSGTMFQEHSSNDVAKPVVQPLPMTTNMIPLATTTQANLVSENGESKVKHEKGT* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01025 634 MobiDBLite consensus disorder prediction 414 480 - -
Pte5g01025 634 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 245 280 IPR005172 -
Pte5g01025 634 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 159 194 IPR005172 -
Pte5g01025 634 MobiDBLite consensus disorder prediction 504 523 - -
Pte5g01025 634 MobiDBLite consensus disorder prediction 137 160 - -
Pte5g01025 634 ProSiteProfiles CRC domain profile. 158 282 IPR005172 -
Pte5g01025 634 PANTHER TESMIN/TSO1-RELATED 47 553 IPR028307 -
Pte5g01025 634 MobiDBLite consensus disorder prediction 452 473 - -
Pte5g01025 634 MobiDBLite consensus disorder prediction 59 82 - -
Pte5g01025 634 SMART CXC_2 157 197 IPR033467 -
Pte5g01025 634 SMART CXC_2 242 283 IPR033467 -
Pte5g01025 634 MobiDBLite consensus disorder prediction 129 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01025 Pte-Chr5 30075353 30079994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01025 37 563 CPP Transcription Factor Family AT4G29000 54.159 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte5g01025 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01025 - - qsa:O6P43_007909 764.992