Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01019 ATGGGGGAAGGCGAAGGAGGTGATTGTCATCCGAAGAATGTGCAATCAGGCACTGCTGTGATGGCGGTGGGGACATCGGAGGCGGCGGCGGCGGCGGCTTTGCCTTCTGATATTCCAGCTAAAAGATTGGCGAGGCAACTTGATTTCACTGGATACGGTGGGGTGGCAGGGGGTGTAACTTCGCAAGAACAGCAGCAAAAGCAATCACAGCCACAGATTCAGACACAGCCGCAGCCTCAGGTACAGCTACGACCTCAGGTTCAGCTACAGCCTCTGTCTCCTATGATTCTGCAAAATCAGCAGCCAAGGCCACAAACACATCCACAACTTCAACTATCGACACTAACTCAGCAACAGGTGATGATGATGCCAATTGCAGCTCAAGTCGCACATCCTCCTGCAAGGGTTGGAAAACCAGAATCTCCAAAGTCAAGATCAAGGCCTAACTTCGATATGAAAGATGGAACTCCAAAAAAGCAAAAACAGTGTAATTGTAAACACTCAAAATGCTTAAAGTTATATTGTGAATGTTTTGCATCGGGGATATATTGTGACGGATGCAATTGTTCCAATTGTTGTAACAATGTTGAAAATGAAGCTGCTAGACGGGAAGCTGTCGAAGCTACCTTGGAGCGCAATCCAAATGCGTTTAGACCAAAAATTGCAAGTAGTCCTCATGGGACACGAGACAGTAGGGAAGAAGTCGGGGAGATTTTACTGTTGGGAAAGCACAACAAAGGATGCCACTGCAGGAAATCAGGATGTCTGAAAAAGTACTGTGAATGCTTCCAGGCCAACATTCTTTGCTCTGAGAATTGTAAATGCATAGACTGCAAGAATTATGAGGGAAGTGAAGAAAGACAGGCATTATTTCATGGAGATCAAAATAACATGACATATATTCAACAGGCAGCAAATGCTGCCATAACTGGAGCTATAGGATCCTCTGGATATACCTCTCCTCCAGCCAAGAGAAGAAAAGGACAGGAGCTCCTCTTTGGCTCCATGACAAAGGATCTGTCGGCACACAGGCTTGGTCCCTTTCAACAGGTAAACCATCCCAGACCTCCTGCACCCTCTTCATCTTTACCTTCGATGTCAGGGACTCGAGTTGGTGTACCTACATTGGGCGCACCGAAAGTTACATATAGATCTCTGTTAGCAGACATCATTCAGCCACAACACTTGAAGGAGATATGTTCCTATTTGGTGGTAATGTCAGACCAAGCTGCAAAGGCACTTGCAGATGAAAAAAATTCAAAGGAAAATCAGAGAGAATATAAAACAGAAGGTTCCCTTGCTTCTTCAATACAAGAGCAAGTGCTCAGCAGAAGAGATGCTGATGTTGACAAAACTGACACCACTAATTGTTCAAATTCAAACCAGGCAGATAAAATTAGTCCAGATGATTCCAGTTCAGATGGCATTGATGCCCAGAAGGCAAGGCCAGTGTCCCCTGTAACCTTAGCTTTGATGTGCCACGAACCAGAAACTATGTTCATGACAACAGCTTCCTCTAACGGCATGACAACGCATACCACGGAGACATCTTCACAGCTTCCAAATGGACAAGGCATAACAGAGGTTTATGCAGACCAAGAAAGACTTGTGTTAACAACATTTAGAGATTTCCTAAATAGGATGATCACAATGGGAGAAATAAATGAAACGAAGTGTTCTCCCATAGCAAGATGTGAAACAGATTCTCAAAAGGATGCCATCAATAATGGCCATAGGAGTGGCGGTTCTGGCACAATGTTCCAGGAGCACTCGAGCAATGATGTCGCAAAACCTGTTGTACAGCCATTGCCAATGACTACCAACATGATTCCTCTGGCAACTACGACGCAGGCAAACCTTGTTTCTGAAAATGGTGAAAGCAAGGTAAAGCATGAAAAGGGCACGTAG 1908 0.4507 MGEGEGGDCHPKNVQSGTAVMAVGTSEAAAAAALPSDIPAKRLARQLDFTGYGGVAGGVTSQEQQQKQSQPQIQTQPQPQVQLRPQVQLQPLSPMILQNQQPRPQTHPQLQLSTLTQQQVMMMPIAAQVAHPPARVGKPESPKSRSRPNFDMKDGTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCSNCCNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEVGEILLLGKHNKGCHCRKSGCLKKYCECFQANILCSENCKCIDCKNYEGSEERQALFHGDQNNMTYIQQAANAAITGAIGSSGYTSPPAKRRKGQELLFGSMTKDLSAHRLGPFQQVNHPRPPAPSSSLPSMSGTRVGVPTLGAPKVTYRSLLADIIQPQHLKEICSYLVVMSDQAAKALADEKNSKENQREYKTEGSLASSIQEQVLSRRDADVDKTDTTNCSNSNQADKISPDDSSSDGIDAQKARPVSPVTLALMCHEPETMFMTTASSNGMTTHTTETSSQLPNGQGITEVYADQERLVLTTFRDFLNRMITMGEINETKCSPIARCETDSQKDAINNGHRSGGSGTMFQEHSSNDVAKPVVQPLPMTTNMIPLATTTQANLVSENGESKVKHEKGT* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01019 635 MobiDBLite consensus disorder prediction 453 474 - -
Pte5g01019 635 MobiDBLite consensus disorder prediction 347 367 - -
Pte5g01019 635 MobiDBLite consensus disorder prediction 60 83 - -
Pte5g01019 635 SMART CXC_2 243 284 IPR033467 -
Pte5g01019 635 SMART CXC_2 158 198 IPR033467 -
Pte5g01019 635 PANTHER TESMIN/TSO1-RELATED 41 554 IPR028307 -
Pte5g01019 635 MobiDBLite consensus disorder prediction 130 162 - -
Pte5g01019 635 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 160 195 IPR005172 -
Pte5g01019 635 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 246 281 IPR005172 -
Pte5g01019 635 MobiDBLite consensus disorder prediction 415 481 - -
Pte5g01019 635 MobiDBLite consensus disorder prediction 505 524 - -
Pte5g01019 635 ProSiteProfiles CRC domain profile. 159 283 IPR005172 -
Pte5g01019 635 MobiDBLite consensus disorder prediction 138 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01019 Pte-Chr5 29999934 30004539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01019 38 564 CPP Transcription Factor Family AT4G29000 55.140 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte5g01019 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01019 - - qsa:O6P43_007909 761.911