Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01011 ATGAACTGGTCGATGTTCATTGGGAGCTATATAGCTGCTTTCGTAATGTTATGGAGATTGGCCATTGTGGGGTTTCCTTTTGCGCTGCTTCTTGTAATCCCTGGTTTAGTGTATGGGAGAACCTTGATGGGATTGGCTAGGAAGATCAGGGAGGAGTACAATCAAGCCGGTACAATAGTAGAGCAGGCAATCTCTTCGGTCAGAACAGTTTATGCCTTTGTCGGAGAAAACAAGACCATTGCTTCTTTTTCTGCAGCTTTACAATATTCAGTGAAGTTAGGTCTGAGACAAGGCTTAGCAAAAGGCATAGCTATTGGAAGCAATGGTATTGTGTTTGCCATTTGGTCTTTCATTGCTTTTTATGGCAGCAGATTGGTCATGTATCATGGAGTTGATGGAGGCACAGTTTTTGCAGTTGGTGCAGCAATAGCAGTTGGTGGACTAGCTTTAGGTTCTGGTTTGTCTAATTTGAAGTACTTCTCAGAAGCTACCTCAGCTGGGGAACGCATTATGGAAGTGATTAAAAGAGTTCCCAAGATTGATTCAGAAAACTTGTCTGGTGAAATTCTGGATAACGTTTCAGGGGAAGTTGAGTTTCGAAGTGTTCAGTTTGCATACCCATCAAGGCCTGATAGTATTATCCTGAATGATTTCTGCTTGAAAATCCCAGCTGGCAAGTCAATGGCTTTAGTAGGTGGCAGTGGATCAGGAAAATCTACTGTAGTGTCTCTCCTACAAAGGTTTTATGATCCACTTGCAGGAGATATACTCGTTGACGGGGTCACCATTCGTAAGCTTCAGTTAAAGTGGCTAAGGTCACAGATGGGTTTGGTGAGCCAGGAGCCAGCACTTTTTGCAACCTCCATTAAAGAGAACATACTCTTTGGTAAAGAGGATGCAACAATGGAAGAAGTCATAGAAGCTGCCACAGCCTCCAATGCTCATAATTTCATCTCACAGCTGCCTCAAGGATATGATACGCAGGTTGGTGAAAGAGGTGTACAGATGTCTGGAGGACAAAAACAAAGGATTGCAATTGCCAGGGCTATCATAAAGAAACCCCAAATACTTCTGCTAGATGAAGCCACCAGTGCATTAGACTCTGAATCCGAACGAGTTGTTCAAGAAGCGTTGGACAGAGCCGCAGTAGGTCGGACCACCATTATCATTGCTCACCGGTTGTCCACCATAAGAAATGCAGATGTCATTGCTGTTGTGCAGAATGGAAAGGTCATGGAAATGGGATCACATGATGAGCTCATTCAAAATGACAATGGTCTTTACTCCTCACTTGTTCGGCTTCAGCAGACAGACCAAAAATCAAAAGGACAAGATGATCACAAATTCACATGTCCCCCATCGTCAATATCAAACATGGACATTGTAAACAACACAAGCAGCCGTAGGCTGTCTTTGGTTAGCAGATCAAGCTCTGGAAACTCAGCAGCACCTAATCGAGTTTCATTTAATGACCAAGATTGTGCTAAAGAAGAAGAAAAACTCCCTGTGCCCTCATTTAGAAGATTGTTAGCTTTGAATCTTCCAGAGTGGAAGCAAGCAAGCACGGGATGTTTGGCAGCTCTACTGTTTGGTGCTGTTCAACCAGTATATTCATTTGCAATGGGATCGATGATCTCTGTGTACTTTTTGACAGACCATGATGAGATCAAAAGAAAGACAAGGATTTACTCTCTAAGTTTTCTGGGATTGTCTGTGTTCTCATTATTCATCAATATAATCCAGCACTACAATTTTGCTTACATGGGAGAGCATCTAACCAAAAGGGTAAGAGAGCGAATGCTTTCTAAGATGCTCACATTTGAAATAGGGTGGTATGACCAAGATGAAAATTCCAGTGGTGCTATTTGTTCTAGACTTGCTAAAGATGCCAATGTGGTGAGATCGTTGGTTGGAGATCGCATGGGGCTTCTTGTTCAAACTGTGTCTGCAGTTTTAGTCGCTTGCACCATGGGTCTTGTGATTGCATGGAGGCTTGCCTTAGTTATGATAGCTGTGCAACCTCTCGTCATTATCAGCTTCTACTGCAGGCGTGTTTTGTTAAGGAGCATGTCCCAAAAGGCCATCAAGGCTCAAGATGAGTGCTGTAAGCTTGCAGCTGAGGCTGTAACCAATCTCAGAACTGTCAGTGCCTTTTCTTCTCAAGAAAGAATACTGAAAATGTTAGAGAAGATGCAAGAAGGCCCTCGTCTCGAGACCATCAAACAATCATGGTATGCTGGCATTGGCCTTGGTTGTTCACAGAGTCTGAACTCCTTAACCTGGGCTTTAGATTTTTGGTATGGTGGAAAACTAATAGCACAGGGTTACATCTCATCAGAAGCATTGTTTCAGACATTCATGATTTTGGTGAGTACAGGTCGTGTTATTGCTGATGCAGGAAGCATGACCACAGATCTAGCCAAGGGGTCAGATGCTGTTAGCACAGTATTTGCCGTTCTGGACAGATACACTAAAATTGAGCCTGAAGACCCTGATGGTTACAAGCCTGAGAAAATAAATGGGGACGTAGAATTTAAGGATGTCCATTTTGCTTATCCCGCTAGACCAGATGTGATGATCTTCCTAGGCTTCTCAATTAAAATTGAAGCAGGAAAATCAACGGCATTAGTTGGACAGAGTGGATCAGGCAAGTCTACCATCATAGCTCTCATAGAAAGATTCTACGATCCACTCAAAGGTCTTATAATGATAGATGGACGCGACGTTAAGTCATACCACCTGAGATCACTAAGGAAACACATTGCACTTGTTAGCCAAGAGCCGACATTGTTTGCTGGCACCATAAAAGATAACATTGTATATGGGGCATCCGATAAAATCGATGAATCTGAGATTATCGAAGCTGCTAGAGCTGCTAATGCACACGATTTTATTTCAAGTTTGAGAGATGGATATGATACATTGTGCGGAGACAAAGGTGTACAACTTTCAGGTGGTCAAAAGCAACGTATTGCAATCGCTAGAGCTATATTGATGAATCCATCAGTGTTGCTGTTGGATGAGGCAACCAGTGCCTTGGACAGTCAGTCAGAGAAAATTGTACAAGATGCATTAGAGAGAGTCATGGTGGGAAGGACGAGTATAGTGGTGGCACATAGGTTGAGTACCATTCAGAATTGTGATTTGATTGCTGTGCTAGAGAAAGGGAGAGTGGTGGAGAAAGGGACACACTCTTCCTTGTTGGCTAAGGGACCGTCTGGAGCTTACTACTCTTTGGTGAATCTTCAGAGGACACCACATAATACCCACTGA 3273 0.4314 MNWSMFIGSYIAAFVMLWRLAIVGFPFALLLVIPGLVYGRTLMGLARKIREEYNQAGTIVEQAISSVRTVYAFVGENKTIASFSAALQYSVKLGLRQGLAKGIAIGSNGIVFAIWSFIAFYGSRLVMYHGVDGGTVFAVGAAIAVGGLALGSGLSNLKYFSEATSAGERIMEVIKRVPKIDSENLSGEILDNVSGEVEFRSVQFAYPSRPDSIILNDFCLKIPAGKSMALVGGSGSGKSTVVSLLQRFYDPLAGDILVDGVTIRKLQLKWLRSQMGLVSQEPALFATSIKENILFGKEDATMEEVIEAATASNAHNFISQLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKKPQILLLDEATSALDSESERVVQEALDRAAVGRTTIIIAHRLSTIRNADVIAVVQNGKVMEMGSHDELIQNDNGLYSSLVRLQQTDQKSKGQDDHKFTCPPSSISNMDIVNNTSSRRLSLVSRSSSGNSAAPNRVSFNDQDCAKEEEKLPVPSFRRLLALNLPEWKQASTGCLAALLFGAVQPVYSFAMGSMISVYFLTDHDEIKRKTRIYSLSFLGLSVFSLFINIIQHYNFAYMGEHLTKRVRERMLSKMLTFEIGWYDQDENSSGAICSRLAKDANVVRSLVGDRMGLLVQTVSAVLVACTMGLVIAWRLALVMIAVQPLVIISFYCRRVLLRSMSQKAIKAQDECCKLAAEAVTNLRTVSAFSSQERILKMLEKMQEGPRLETIKQSWYAGIGLGCSQSLNSLTWALDFWYGGKLIAQGYISSEALFQTFMILVSTGRVIADAGSMTTDLAKGSDAVSTVFAVLDRYTKIEPEDPDGYKPEKINGDVEFKDVHFAYPARPDVMIFLGFSIKIEAGKSTALVGQSGSGKSTIIALIERFYDPLKGLIMIDGRDVKSYHLRSLRKHIALVSQEPTLFAGTIKDNIVYGASDKIDESEIIEAARAANAHDFISSLRDGYDTLCGDKGVQLSGGQKQRIAIARAILMNPSVLLLDEATSALDSQSEKIVQDALERVMVGRTSIVVAHRLSTIQNCDLIAVLEKGRVVEKGTHSSLLAKGPSGAYYSLVNLQRTPHNTH* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01011 1090 CDD ABC_MTABC3_MDL1_MDL2 843 1083 - -
Pte5g01011 1090 SUPERFAMILY ABC transporter transmembrane region 3 181 IPR036640 GO:0005524|GO:0016020
Pte5g01011 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 832 1083 IPR027417 -
Pte5g01011 1090 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 523 808 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte5g01011 1090 PANTHER ABC TRANSPORTER B FAMILY 2 544 IPR039421 -
Pte5g01011 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 435 IPR027417 -
Pte5g01011 1090 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 5 162 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte5g01011 1090 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 843 1080 IPR003439 GO:0005524
Pte5g01011 1090 Pfam ABC transporter transmembrane region 4 140 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte5g01011 1090 Pfam ABC transporter transmembrane region 523 791 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte5g01011 1090 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 197 433 IPR003439 GO:0005524
Pte5g01011 1090 Gene3D - 833 1089 IPR027417 -
Pte5g01011 1090 Gene3D ABC transporter type 1, transmembrane domain 3 817 IPR036640 GO:0005524|GO:0016020
Pte5g01011 1090 ProSitePatterns ABC transporters family signature. 983 997 IPR017871 GO:0005524|GO:0016887
Pte5g01011 1090 FunFam ABC transporter B family member 4 833 1088 - -
Pte5g01011 1090 ProSitePatterns ABC transporters family signature. 336 350 IPR017871 GO:0005524|GO:0016887
Pte5g01011 1090 CDD ABC_6TM_Pgp_ABCB1_D2_like 510 826 - -
Pte5g01011 1090 FunFam ABC transporter B family member 4 187 442 - -
Pte5g01011 1090 SMART AAA_5 870 1043 IPR003593 GO:0016887
Pte5g01011 1090 SMART AAA_5 224 410 IPR003593 GO:0016887
Pte5g01011 1090 Pfam ABC transporter 864 1011 IPR003439 GO:0005524
Pte5g01011 1090 Pfam ABC transporter 215 364 IPR003439 GO:0005524
Pte5g01011 1090 SUPERFAMILY ABC transporter transmembrane region 502 828 IPR036640 GO:0005524|GO:0016020
Pte5g01011 1090 CDD ABC_MTABC3_MDL1_MDL2 197 435 - -
Pte5g01011 1090 Gene3D - 195 448 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01011 Pte-Chr5 29739626 29744059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01011 2 436 Calmodulin-binding Proteins AT2G36910 43.151 1.91e-100 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01011 K05658 - fve:101310339 1697.95