Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00995 ATGCATAAAGGTCTTCTGCAAAGCTCACCGGTGCAACAAATGATGGCCGGAAACCCTACCTGTGGGAACATCAATAGCATGATGAGGCCAACTGCTCAACAAACATCTCCTTTCTTATCTACTTCAAACTTGTTTCCTGCTAATGCATCCACCAGTTCACTTCATTCTCATATACCTTCATGGAATGAGAACCAAGATCAGCTTCCAGCATCACGGAGTCAACTACTGATTGGTGCTAAGGGCGAGATGGGAAAGTGTCAAGCCAAAGAATTTGAAAACTGGGAAAGCCAAAGGTTAAGTCAGGCGGTAAGTGCAAATATCGTTGATGTCAAGGGAAACTCAGTAGCCAGATATGTATGTGGACAAGGAATTGAAGAAATTCAAGCAGCAAACTCTTGGTCTCAAACGATGTCAGTTTCCTCTCCAAACTCGTCTGTGTCAAGTTTCAGCAGCAACATTCTTGATTTTGCAAACAACACGGATGGAAAGTTTCCACCTTCAGATCCATTTTCTGAGTGTAACGGCATTGCATCTGGTGGAACCCTGAAGAAAGCTAGGGTTCAACCTTCAAGTTCAACAACTCCAACTACTACCTTCAAGGTCAGGAAGGAGAAATTAGGTGACAGAGTCACAGCCCTTCACCAACTGGTTTCCCCATTTGGAAAGACTGATACAGCATCTGTGTTGTTAGAAGCTATTGGCTACATCAGATTCCTTCAGAGTCAAATTGAGGCCCTCAGCTCACCTTACTTGGGCAGTGGATCTAGAAACACAAAGCAGCAGCAGCAGCAGCAGTCAGTACTATTGAATGGCAACCGCAAGAAGAGGAAGGAATTATGTGAACAGGATACTCAAGAAGAATCTCTGAAGGACCTGAGAAGTAGGGGGTTATGTCTGGTTCCACTTTCATGTACAGTTCAAGTTGGGAGTGTCGACAATGGAGCAGAGTACTTCTGGGCTCCTGGATTTGGTGGATGCTTTCAGTAG 987 0.4468 MHKGLLQSSPVQQMMAGNPTCGNINSMMRPTAQQTSPFLSTSNLFPANASTSSLHSHIPSWNENQDQLPASRSQLLIGAKGEMGKCQAKEFENWESQRLSQAVSANIVDVKGNSVARYVCGQGIEEIQAANSWSQTMSVSSPNSSVSSFSSNILDFANNTDGKFPPSDPFSECNGIASGGTLKKARVQPSSSTTPTTTFKVRKEKLGDRVTALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSSPYLGSGSRNTKQQQQQQSVLLNGNRKKRKELCEQDTQEESLKDLRSRGLCLVPLSCTVQVGSVDNGAEYFWAPGFGGCFQ* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00995 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 52 308 - -
Pte5g00995 328 FunFam Transcription factor bHLH123 family 200 264 - -
Pte5g00995 328 CDD bHLH_AtbHLH_like 199 247 IPR045239 -
Pte5g00995 328 Gene3D - 198 268 IPR036638 GO:0046983
Pte5g00995 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 251 IPR036638 GO:0046983
Pte5g00995 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 190 239 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00995 Pte-Chr5 29351632 29354773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00995 91 265 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 47.264 2.34e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00995 - - qlo:115975694 342.813