LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte5g00991	ATGGTGAGGTTATTACCTATGGCATCCACAATTCGACCCTCTCTCTGTACCTTGAGATTACCTGCTACCTCTCGTCTGTGCGCTTCTAAGCAGTATTTCCGCGACCCACCTCGGCGCTCGTCTCTGTTTCATCATTCTGGAGGCACTCGACAAGCCCACATTTTTGGCTTGGAAAAATTCAAGCTTTCGAGAGTTGATGGTAACCATCTGCGATTGAAAGCATCTGGAAATGTGGCTCAAGGAAGCTCAACTTCTGCACCAGAAAATGCACGAGAATGGGTGAAACAGGACAAGAGAAGGTTGCTTCATGTTGTCTATCGTGTAGGGGATCTTGACCGGACAATAAAATTTTACACGGAGTGCCTGGGAATGAAGCTGTTAAGAAAACGTGACATACCCGAGGAGAGATACACAAATGCTTTCCTAGGATATGGACCAGAAGATTCGCATTTTGTGATCGAACTAACTTACAATTATGGAGTCGAGAAGTATGATGTGGGATCCGGCTTTGGCCATTTTGGAATTGCAATCGAAGATGTTGCTAAAACAGTTGAACTGATAAAGGCTAAAGGCGGTAAAGTAACTAGAGAGCCAGGTCCTGTGAAAGGTGGCAAAACTGTAATTGCATTCATTGAAGATCCGGATGGTTATAAGTTTGAACTGTTGGAAAGAGGCCCTACCCCTGAGCCCTTGTGCCAAGTAATGTTACGTGTTGGAGATTTGGATCGTTCCACAGAATTTTATGAGAAGGCATTTGGCATGGAGCTTCTTCGCAAGCGAGATAACCCAGAGTATAAGTACACTATAGCAATGCTCGGTTATGGTCCAGAAGACAAAAGCACTGTTCTGGAGTTGACATACAACTATGGAGTCACTGAATATGACAAAGGAAATGCTTATGCTCAGATTGCAATAGGTACAGATGATGTTTACAGAACAGCAGAAGCCGTCAAATTGTTTGGAGGAAAGATAACGCGGGAACCTGGACCACTTCCTGGAATCAACACAAAAATCACTGCATGCTTGGATCCTGATGGTTGGAAGACGGTATTTGTAGATAATTATGATTTTCTCAAGGAGTTGGAGCAAATATAG	1095	0.4374	MVRLLPMASTIRPSLCTLRLPATSRLCASKQYFRDPPRRSSLFHHSGGTRQAHIFGLEKFKLSRVDGNHLRLKASGNVAQGSSTSAPENAREWVKQDKRRLLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVEKYDVGSGFGHFGIAIEDVAKTVELIKAKGGKVTREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSTEFYEKAFGMELLRKRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYRTAEAVKLFGGKITREPGPLPGINTKITACLDPDGWKTVFVDNYDFLKELEQI*	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte5g00991	364	ProSitePatterns	Glyoxalase I signature 1.	103	124	IPR018146	GO:0004462\|GO:0046872
	Pte5g00991	364	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	101	221	IPR004360	-
	Pte5g00991	364	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	233	348	IPR004360	-
	Pte5g00991	364	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	99	229	IPR029068	-
	Pte5g00991	364	NCBIfam	lactoylglutathione lyase	100	225	IPR004361	GO:0004462\|GO:0046872
	Pte5g00991	364	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	231	353	IPR029068	-
	Pte5g00991	364	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	230	354	IPR037523	-
	Pte5g00991	364	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	100	224	IPR037523	-
	Pte5g00991	364	Gene3D	-	74	225	IPR029068	-
	Pte5g00991	364	Gene3D	-	227	362	IPR029068	-
	Pte5g00991	364	FunFam	Lactoylglutathione lyase	97	226	-	-
	Pte5g00991	364	ProSitePatterns	Glyoxalase I signature 1.	233	254	IPR018146	GO:0004462\|GO:0046872
	Pte5g00991	364	CDD	GlxI_Ni	101	222	-	-
	Pte5g00991	364	CDD	GlxI_Ni	231	352	-	-
	Pte5g00991	364	PANTHER	LACTOYLGLUTATHIONE LYASE	82	362	-	-
	Pte5g00991	364	FunFam	Lactoylglutathione lyase	227	362	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte5g00991	Pte-Chr5	29081714	29087318	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte5g00991	233	351	Calmodulin-binding Proteins	AT1G08110	27.586	3.58e-10	57.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte5g00991	K01759		-	jre:108986682	598.971