Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00990 ATGCGTAGCGTACCGGCTTGGATTCTCTTCCTCGTCTCATTTGTACACTTCGGGGTTGCAGATGATTCAGAGGTAGAAGCGCTTTTGAAATTCAAGGACTCGTTGGAGAACACCAACGCGTTATCCACTTGGAACAAATTAACTAACCCAGACCCATGCAATGGGAAAACAGAAAATTGGGTTGGCGTTCTTTGTGCTAATGATCAAGTTTGGGGGCTTAAACTTGAGAACTTGGGTCTCAAGGGTACCATAGACACTGAAGCACTCGGCCAGTTGAAATCCTTGAGAACCATAAGTTTAATGAACAACAGCTTCGAAGGCCAACTTCCAGATATGAGCCAAATATCTAGTCTAAAATCGCTATACCTCTCCAATAATCGATTCTCAGGGGAGATTCCATCCTCAAGTTTCCAGGGGTTGGTCTGGTTGAAGAAACTGTATTTAGAGAATAATCAATTCACGGGTGCCATTCCAAATTCCCTCGTACCTTTGCCTAAACTTGTCGAGTTGATGTTTCAGGACAACCAATTTGATGGCAAGCTTCCTGATTTTCAACAGAGGTTCCTCATTTTTAGTGTAGCGAACAATAGGCTGGAGGGTCGAATTCCATTAGCCCTTACCAACTTGCCAGCCAGCTCTTTCTCGGATATATTTGTATCTCACTTTAATTTTCTATTGATGGATGACGCAGGAAACGAAGGTCTATGTGGAACGCCATTAGAGTCATGTCAGAAAGGGCTTTCACTTGTGAGTAAAATTGTGCTTGGCATGTCTATTGTGCTGGCAGTGATTGTTATTCTGGTGGCTATCTTCATCTTCCTTCGACGAAAACGAACAAAGGAAGCTGGGGATTTTTCATCGATGACTTTGCCCAAGAAATCAAAAGCAAAGGAAGATGACTGTCCTAGCAGATCGGGATCGGATACCGCATCGGTGAGCAGCAGGAGGGGCGAGATGAAGCTGACATTTTTGAGGGATGATAGACAGAAGTTTGATTTGCAAGAATTACTGAGAGCGTCTGCTGAAATATTAGGCAGTGGGTACTATAGTTCATCATACAAGGCTGGTTTGACGAATGGACCAATGATTGTTGTCAAGAGGTTTAAACAAATGAACAACCTGGGGAAGGAAGAGTTTCATGAGCATATGAGAAGATTGGGCAGGTTGAGCAACCCCAACTTGCTTCCTATTGTGGCTTATTATTATAGAAGGGAAGAGAAGCTCATGGTAACCGACCATGTCGACAATGGCAGCTTGGCTGTTCGTCTTCACGGGCACCATGCATTACGCGAAGCAACCCTGGATTGGCCCACGAGGGTGAAAATCGTGAAAGGGATAACAAAGGGTCTGCAGTATCTGTATAATGAGTTGCCAAGTCTAGTTGCACCTCATGGACATCTGAAATCCTCCAATGTTCTGCTGAACGAGTCTTTCGAGCCATTGCTTGCAGACTATGGCTTAATCCCTGTGATGAACCCGGAGCAAGCCCGAGAACTGATGGTAGCCTACAAGTCTCCTGAGTTCTTGCAAAATGGCCGGATTACAAAGAAGACTGATATATGGAGCTTCGGGATACTGCTGTTAGAAATCTTAACAGGTCAGTTACCAGCCAGCTTTCTACAACATGGCAAAGCCAATGAGGAAGACATATCAAGTTGGATCAGTTCAGTGGTTCCGGAGAACTGGACAAATGAGGTATTTGACAAAGAGATGGGTGGCACCAGTGGGTGTGAAGGGGAGATGGGAAAGTTGCTACAGATTGCTTTAAGTTGCTGTGAGGCAGATGTGGATAAGAGGTTGGATTTGAAAGAGGTTGTTGCAAGAATTGAGCAAGTCAAAGAGAAGGATGGTGCACATGCATGA 1863 0.4466 MRSVPAWILFLVSFVHFGVADDSEVEALLKFKDSLENTNALSTWNKLTNPDPCNGKTENWVGVLCANDQVWGLKLENLGLKGTIDTEALGQLKSLRTISLMNNSFEGQLPDMSQISSLKSLYLSNNRFSGEIPSSSFQGLVWLKKLYLENNQFTGAIPNSLVPLPKLVELMFQDNQFDGKLPDFQQRFLIFSVANNRLEGRIPLALTNLPASSFSDIFVSHFNFLLMDDAGNEGLCGTPLESCQKGLSLVSKIVLGMSIVLAVIVILVAIFIFLRRKRTKEAGDFSSMTLPKKSKAKEDDCPSRSGSDTASVSSRRGEMKLTFLRDDRQKFDLQELLRASAEILGSGYYSSSYKAGLTNGPMIVVKRFKQMNNLGKEEFHEHMRRLGRLSNPNLLPIVAYYYRREEKLMVTDHVDNGSLAVRLHGHHALREATLDWPTRVKIVKGITKGLQYLYNELPSLVAPHGHLKSSNVLLNESFEPLLADYGLIPVMNPEQARELMVAYKSPEFLQNGRITKKTDIWSFGILLLEILTGQLPASFLQHGKANEEDISSWISSVVPENWTNEVFDKEMGGTSGCEGEMGKLLQIALSCCEADVDKRLDLKEVVARIEQVKEKDGAHA* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00990 620 Gene3D Phosphorylase Kinase; domain 1 303 413 - -
Pte5g00990 620 ProSiteProfiles Leucine-rich repeat profile. 117 139 IPR001611 GO:0005515
Pte5g00990 620 FunFam Pollen receptor-like kinase 1 414 620 - -
Pte5g00990 620 FunFam Nuclear pore complex protein NUP107 21 183 - -
Pte5g00990 620 Pfam Leucine rich repeat N-terminal domain 22 65 IPR013210 -
Pte5g00990 620 Gene3D Transferase(Phosphotransferase) domain 1 414 619 - -
Pte5g00990 620 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 616 IPR046959 -
Pte5g00990 620 ProSiteProfiles Protein kinase domain profile. 338 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00990 620 SUPERFAMILY L domain-like 21 225 - -
Pte5g00990 620 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Pte5g00990 620 Gene3D Ribonuclease Inhibitor 20 240 IPR032675 -
Pte5g00990 620 Pfam Protein kinase domain 341 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00990 620 MobiDBLite consensus disorder prediction 292 314 - -
Pte5g00990 620 SUPERFAMILY Protein kinase-like (PK-like) 342 610 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00990 Pte-Chr5 29027357 29029663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00990 8 617 Receptor kinase-like Gene Family AT5G35390 48.758 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte5g00990 Pkinase 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00990 - - qsa:O6P43_003880 705.286