Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00989 ATGCGAATCAACCTCCCCAACTGGTTTGGAAGAATCAACTGGGCTACTTCATGTGATTATATCCATGAGCAAAACTCCAAAAATGTACACATCACTCCCTTCATTAAGCATGCCCATGCTTGCATACTCGGGAGAAACGTATCTACATCACAACTCTATAAAAACTGTGGCACTGCAACCATCGGCAGAGGAGCTGCTATGAACTCGGACGAACAACAACTTCGTATTGAAAATGCCAAGGTCAAAGCTGTGGTGGAGAAACTCCGATCAGCAATGGTGAGGTATCCGCAAGGAACAACAACATCGCCTTCATCTACTGCAGAAAATGACCAAGAGCACAAAAGGTCGTTGGATTATTACAGTGGAATTTTTGTTGAGAAGAAAAAAATTATAGAACTTGTTAACCAAGCAGTTGATGAGCTAATAAAGATGGCTACTTTTGGGGAACCATTGTGGATTCGTAGTGTTGAAACTGGACGTGAAATACTTACTATGATGAGTACACGAAAGAGTTCAACACTTCTGAAAGTTCAAAGCAAACCAAAACAAGAGAGATCCATTGAGGCATCAAGAGAAACAGGAGTCATTCTGGTCCAGTGA 600 0.4167 MRINLPNWFGRINWATSCDYIHEQNSKNVHITPFIKHAHACILGRNVSTSQLYKNCGTATIGRGAAMNSDEQQLRIENAKVKAVVEKLRSAMVRYPQGTTTSPSSTAENDQEHKRSLDYYSGIFVEKKKIIELVNQAVDELIKMATFGEPLWIRSVETGREILTMMSTRKSSTLLKVQSKPKQERSIEASRETGVILVQ* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00989 199 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 49 198 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00989 Pte-Chr5 29025313 29026062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00989 74 198 Homeobox Transcription Factor Family AT1G79840 46.457 2.61e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00989 K09338 - qsu:111988083 165.622