Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00954 ATGCCTTCTCTTCTCGATGAGTGCCGGGAGCACCTGCTGGTGATAGATGGGCATGGAGAAGACCACGGCAGCGTAGAAATTGAAACGCAACCAAAATTCAGGATTCGAAATCTGACCAAAACTATAGATGGTGGGATAGAAATACTCAAAGATATAGCGATTGAAATACCAAAGGGTAAGATCACAGGGATCATAGGGCCTAGTGGTAGCGGCAAATCAACAATTTTAAGGGCATTGAACCGACTCTGGGAACCTCCCAGGGGTACTGTATTTCTGGATGGTCAGGACATCTGCGATCTTGACGTTGTCTCTCTCCGGCGTAGGGTAGGCATGCTCTTCCAGATTCCTGTCCTTTTTGAAGGCACAGTTGCTGACAACATACAGTATGGACCCCAGTTACGAGGAAAAAGGCTGAGTGATGAAGAGATTCTCAAGTTGCTGGAAATCGCAGACCTTGACCCTTCTTTTCTGAACAAGATTGGTTCTGAGCTGTCTGTAGGCCAAGCTCAAAGGGTTGCACTTGCTAGAACTTTAGCTAATGAACCGGAGGTTTTGGTGCTGGATGAGCCAACGAGTGCGTTGGATCCAATATCAACTGAAAACATAGAGGATGCGCTGGTGAAGCTGAAAAGGAATACTGAAATGACAGTCATAATGGTCTCTCATAGCATCAAACAAATACAGAGGATAGCTGACATAATCTGCCTCGTAGTGGATGGTGAAATTGTTGAGGTTTTGAGGCCTGATCAACTTTCTCAGGCCAAGCATCCCATGGCACACAAATTTCTTCAACTCAGCTCTTAG 804 0.459 MPSLLDECREHLLVIDGHGEDHGSVEIETQPKFRIRNLTKTIDGGIEILKDIAIEIPKGKITGIIGPSGSGKSTILRALNRLWEPPRGTVFLDGQDICDLDVVSLRRRVGMLFQIPVLFEGTVADNIQYGPQLRGKRLSDEEILKLLEIADLDPSFLNKIGSELSVGQAQRVALARTLANEPEVLVLDEPTSALDPISTENIEDALVKLKRNTEMTVIMVSHSIKQIQRIADIICLVVDGEIVEVLRPDQLSQAKHPMAHKFLQLSS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00954 267 FunFam ABC transporter, ATP-binding protein 30 262 - -
Pte5g00954 267 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 7 266 IPR005670 GO:0005315|GO:0016020|GO:0035435
Pte5g00954 267 SMART AAA_5 58 249 IPR003593 GO:0016887
Pte5g00954 267 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 264 IPR003439 GO:0005524
Pte5g00954 267 Pfam ABC transporter 49 192 IPR003439 GO:0005524
Pte5g00954 267 Gene3D - 30 266 IPR027417 -
Pte5g00954 267 CDD ABC_PstB_phosphate_transporter 33 251 IPR005670 GO:0005315|GO:0016020|GO:0035435
Pte5g00954 267 ProSitePatterns ABC transporters family signature. 164 178 IPR017871 GO:0005524|GO:0016887
Pte5g00954 267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 254 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00954 Pte-Chr5 28100966 28103282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00954 46 265 Calmodulin-binding Proteins AT2G36910 32.189 7.12e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00954 K02068 - qsa:O6P43_007813 382.874