LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte5g00946	ATGGTAGTGAGAGACTCCTCGGCCTCGCACGTTAAAGTTGAAGTCTCAATTCCAGTTCCAGTCCGACACAAATTTAAGAGAGAAGACTGTAAGCGTACCAAACATGATTCCGATTTCTCCGAATGGAAGATTCTTGTTGGCCCGTCTGATTGGACAGACTATCATAAAGGGAAAGAAGGGTTGGCTAAGTACAGGGTTCACAACCTTCCCGGGAGATCTGGTCCTGGCGTTTATGAATTAGGTATTGCTGTGTCTCATTCAGGTTTAGGGCGTGAGATAGGTAAGCTTGATCCAGAACTCATAGTTGTCGTTTATCTTGGTCAAGCTGACAATGTAAGAGTGCGGCTTCAGAGATATGGCAGAACAGGTGCGCATTTGGGCAATGCCCTTATTGCTGGTGATTCAGATAGCACCAAAGGGGCTTCCCTCCAAAATGGACCAGGGCTCTTTGAAGAAATATTTTCTAAAGGCTATCCCATTGTTTACCGATGGGCTCCCATGGAAAGCAAGATAGATGCGGAGAAAACAGAAACTCAGCTACTCAGGATATTTGATTATGCGTGGAACACGACCAAAAATGGTTCAAGACGGCCTGATGACGTACTTCAGAAGCTTAACAAACTTGATTCTGCCCCTGTCAGGTTTCCCAAGATTACCAAGATGCTGCTACCTTTCACTCAGAAGGAAGTGGGTGTCAAAATCAAATCAGTGAAGCCAATCCCTCAGAATAACAGATTATGTACAGACACAGAGGAGGGCAGATACAGCTTCCTACCTCGAATCTTCAACTTCAACCGTTCAAGACCTAGAATAGTTCTTCAGAGAACTAATGGTACTGAAGAGAATGGTAGTCTATGTGGCGTGGCCTTAGGTAGTGGCTCCGTTTGTACAAGACCAACTGTCAAAGGAAGAAAGAGGTGTCCACAACACAAAGGGATAAGGATTAACAGCTCAGTGCCACTATTGAAAAGGGAAATGCGGGAGTGCAATTCCGACGTAAAATCGATAAGTTTTGATGATAGAAAAAGCGATGGACAGAAGGTGCATGATTTTCGTGATAGTGTAGAAGAAAATCCAAATCATTCAACTGAGTATCCTTTGAATGAGAAATTCATTCCTATTTGTGGATTCATTTTGGATGATAGCTCCCCGTGTAGTAGGCAACCGACTAAAGGGAGAAAACGTTGCTCTGTTCACAAAGGGAGGAAAGTTCGTTCATCTGTTGCAAATTGA	1233	0.438	MVVRDSSASHVKVEVSIPVPVRHKFKREDCKRTKHDSDFSEWKILVGPSDWTDYHKGKEGLAKYRVHNLPGRSGPGVYELGIAVSHSGLGREIGKLDPELIVVVYLGQADNVRVRLQRYGRTGAHLGNALIAGDSDSTKGASLQNGPGLFEEIFSKGYPIVYRWAPMESKIDAEKTETQLLRIFDYAWNTTKNGSRRPDDVLQKLNKLDSAPVRFPKITKMLLPFTQKEVGVKIKSVKPIPQNNRLCTDTEEGRYSFLPRIFNFNRSRPRIVLQRTNGTEENGSLCGVALGSGSVCTRPTVKGRKRCPQHKGIRINSSVPLLKREMRECNSDVKSISFDDRKSDGQKVHDFRDSVEENPNHSTEYPLNEKFIPICGFILDDSSPCSRQPTKGRKRCSVHKGRKVRSSVAN*	411

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte5g00946	410	Pfam	GIY-YIG domain-containing protein	39	202	-	-
	Pte5g00946	410	MobiDBLite	consensus disorder prediction	385	410	-	-
	Pte5g00946	410	MobiDBLite	consensus disorder prediction	339	359	-	-
	Pte5g00946	410	PANTHER	PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED	21	408	IPR038909	GO:0003677\|GO:0006355
	Pte5g00946	410	MobiDBLite	consensus disorder prediction	339	363	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte5g00946	25	406	HRT Transcription Factor Family	AT5G56780	43.669	1.92e-96	295

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HRT	Pte5g00946		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte5g00946	-		-	qsu:112018326	454.521