Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00944 ATGATGGTTTCTAGGGGACTCTTCGGGTGGTCCCCACCGCACATACAGCCTTTGACGCCGGTTTCTGAGGTATCGGAGCCGCCGGAGTCACCGTCTCCCTATTTAGACCAGAGTGCCGATGCCTCGGCTTCGCCACAGGTTGAGGTGGAAGAGGAGATGGAAGAACCCGAAGAGATTGAGCCGCCTCCTGCTGCTGTCCCCTTCTCGAGGCTCTTTGCCTGTGCGGACGTGTTCGATTGGGTGCTTATGGTCGTTGGCTCGATCGCTGCTGCTGCACACGGCTCGGCTCTTGTTGTGTATTTGCATTATTTTGCGAAGATTGTTCAGGTTATGAGGATGGATGGTCACGATAGATTGGAAGGGCAATTCCAGAGGTTTACGGAGCTTGCCTTAACCATAGTTTACATTGCTGGAGGGGTTTTTGTTGCTGGTTGGATTGAGGTTTCATGCTGGATCTTGACGGGAGAACGGCAGACTGCTGTAATCAGATCAAAATATGTGCAAGTATTACTTAACCAAGAAATGAGTTTCTTTGATACATATGGGAATAATGGAGACATTGTCAGTCAAGTACTGAGTGATGTACTTCTCATTCAGTCTGCTCTTAGTGAAAAGGTTGGAAACTATATTCATAATATGGCCACCTTCTTCAGTGGCCTCGTTATAGGATTTCTTAACTGTTGGCAGATTGCCTTGATCACATTAGGCACTGGTCCGTTCATTGTAGCTGCTGGTGGAATTTCTAACATATTTCTGCATAGGCTTGCTGAGAATATTCAGGATGCATATGCTGAAGCAGCTAGCATTGCAGAACAGGCAGTCTCCTATATTAAGACACTATATGCATTTACAAACGAGACATTGGCCAAGTATTCATATGCAACATCTCTGCAAGCTACTCTCCGATATGGTATATTAATAAGCCTTGTTCAGGGGCTTGGTCTTGGGTTCACTTATGGACTTGCCATATGTTCTTGTGCTCTACAACTTTGGGTTGGAAGATTTCTGGTTATCCATGGAAAAGCTCATGGTGGTGAAATCATAGCATCCCTATTTGCCATAATTCTAAGTGGCCTTGGACTAAATCAAGCAGCTACAAATTTTTATTCATTCGACCAAGGAAGGATTGCTGCCTACAGACTGTTCGAGATGATAAGCCGTTCATCCTCTTCTGTTAATCATGATGGACTCATCCCAGATTCTGTACAGGGAAATATAGAATTCCGAAATGTATATTTCAGCTACCTTTCTCGTCCTGAAATCCCAATCCTGAGTGGATTTTATCTCACTGTACCTACCAAGAAAGCTGTGGCACTTGTAGGCCGCAATGGCTCTGGAAAAAGTAGTATTATTCCACTTATGGAACGCTTTTATGATCCTACATTAGGAGAAGTTCTTTTGGATGGAGAAAATATTAAGAACTTGAAATTGGAATGGCTGAGAAGCCAAATTGGATTAGTTACCCAGGAACCTGCTTTACTTAGTCTCAGCATTCGAGAAAATATTGCATATGGTAGGGATGCTACTTTTGATCAGATTGAGGAGGCTGCTAAAATTGCCCATGCACATACTTTTATCAGCTCACTGGAGAAAGGTTATCATTCGCAGGTGGGGAGGGCTGGCCTGGCATTGACTGAGGAGCAGAAAATAAAGCTTTCTATTGCTAGAGCTGTTCTTTTGAACCCCACGATCCTTTTGCTAGATGAGGTTACTGGTGCGCTTGATTTTGAGTCTGAAAGAACTGTTCAGGAGGCTTTAGATCTTCTCATGTTGGGACGGTCCACAATCATAATTGCTCGAAGGCTTAGTCTTATAAGAAACGCTGATTATATAGCTGTGATGGAAGAGGGCCAGCTTGTTGAAATGGGCACTCATGATGAGTTGTTGCATTTAGATGGTTTGTATGCAGAGCTTCTCAGATGTGAAGAGGCTGCAAAACTTCCTAAGAGGATGCCTGTTCGTAACTACAAGGGGACTGCTGCTTTCCAAATTGAGAAGGATTCTTCAGCAAGTAATAGTTTCCAAGAACCATCTTCACCTAAAATGCTCAAATCTCCTTCTCTCCAGAGAGTTACTGGCACAACCCGACTGTCAGATGGGATGCACAGTTCACAGGAATCACCTAAAAATTTTTGCCCGCCACCTGAGAAGGTACTTGGAAATGGTCAGGCTGTAGATTCATCTGATAAGGAACCATCTATAAGAAGACAGGACAGTTTTGAATTGAGATTGCCGGAGTTGCCTAAGATTTATGTGCACTCTATGGACCGACAAGCTTCAAAGGGATCTGATCCAGAATCCCCCGTGTCACCCTTGTTGACTTCAGATCCTAAAAATGAACGCTCTCATTCACAGACCTTTAGTCGTCCTGATGATCAGTCTGATGATTTGTCAGTTAAAGTAAAGGAAGCAAAATATACGAAGCATCGAGAGCCACCGTCATTCTGGAGGCTGGCACAGCTTAGTTTTGCAGAATGGCTTTATGCTGTTCTGGGAAGCATAGGTGCTGCTATCTTCGGTTCTTTCAATCCTCTCCTTGCTTATGTTATTGCTCTGGTAGTGACAGCATACTATAGAGTAGATGAAGGTCATCACATTCGTCATGAAGTGGACAAGTGGTGCTTAATTATTGCCTGCATGGGTATTGTTACAGTTGTAGCCAACTTTTTGCAGCATTTCTATTTTGGTATTATGGGGGAAAAAATGACAGAACGGGTTCGGAGAATGATGTTTTCAGCTATGCTACGTAATGAAGTTGGGTGGTTTGATGATGAGGAAAACAGTGCTGATAATTTGTCCATGCGCTTGGCAAATGATGCTACATTTGTACGAGCTGCTTTTAGCAACCGACTTTCCATCTTTATACAGGACAGTGCTGCTGTTATTGTTGCTGTTCTTATCGGCATGTTGTTAGAATGGAGATTGGCACTAGTGGCTCTTGCAACTCTTCCAATTCTCATGGTTTCTGCCCTTGCACAGAAGCTGTGGCTTGCTGGTTTTTTCGCGGGAATCCAAGAGATGCACAGAAAAGCATCTTTGGTGCTTGAAGATGCAGTTAGAAACATCTATACTGTTGTAGCATTCTGTGCTGGTAACAAGGTCATGGAGCTCTATAAGTTAAAGCTGAATAAAATATATACGAAGAGTTTTCTCCATGGAATGGCCATTGGTCTTGCATTTGGCTTTTCACAGTTCCTACTCTTCGCTTGCAATGCACTTCTCCTTTGGTTCACTGCAGTATCTGTAAAAAGAGGTTACATGAGTCTGGGAACTGCTCTGAAGGAGTATATGGTTTTTTCTTTTGCTGCATTTGCACTGGTGGAACCTTTTGGTCTGGCTCCTTACATTCTCAAAAGGCGGAAGTCTCTAATTTCAGTATTTGAAATCATTGACCGAGTACCTAAAATCGATCCTGATGACAATTCTGCATTGAAGCCACCAAATGTCTATGGAAGCATTGAGCTGAAAAATGTTGATTTCTGTTATCCAGCTCGTCCAGAAGTATTAGTATTGAGTAATTTTAGTCTAAAAGTAAATGGAGGCCAAACTGTTGCTGTTGTAGGTGTTTCTGGGTCTGGAAAGAGTACCATTATATCTCTAATAGAGAGGTATTATGATCCAGTGGCTGGCCAAGTTCTGCTTGATGGGCGTGATTTAAAACAATATAATATGAGATGGCTGAGGAGTCACCTCGGTCTGGTCCAGCAAGAACCTATAATATTCTCAACAACGATAAAGGAAAACATTATATATGCAAGGCACAACGCTAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCTAACGCTCACCATTTCATTAGCAGCTTGCCTCACGGTTATGACACCCATGTTGGGATGAGGGGGGTTGACTTGACTACAGGACAGAAACAGAGAATTGCAATTGCTCGGGTGGTCCTGAAGAATGCTCCTATTTTGCTATTGGATGAAGCGAGCTCATCAATAGAATCTGAGTCTAGCCGAGTGGTACAAGAGGCTCTAGATACACTTATCATGGGAAACAAGACAACCATTCTAATAGCACATAGGGCTGCAATGATGAGACATGTTGACAACATTGTAGTCCTCAATGGAGGAAAAATAGTGGAAGAAGGGACACATGATTCTTTGGTGGTGAAGAATGGCTTGTATGTCCGATTGATGCAACCACACTTTGGCAAAGGCTTGCGTCAACATCGGCTTATTTAG 4209 0.4322 MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDQSADASASPQVEVEEEMEEPEEIEPPPAAVPFSRLFACADVFDWVLMVVGSIAAAAHGSALVVYLHYFAKIVQVMRMDGHDRLEGQFQRFTELALTIVYIAGGVFVAGWIEVSCWILTGERQTAVIRSKYVQVLLNQEMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFLNCWQIALITLGTGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIKTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIIASLFAIILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNHDGLIPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPTKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGRDATFDQIEEAAKIAHAHTFISSLEKGYHSQVGRAGLALTEEQKIKLSIARAVLLNPTILLLDEVTGALDFESERTVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLHLDGLYAELLRCEEAAKLPKRMPVRNYKGTAAFQIEKDSSASNSFQEPSSPKMLKSPSLQRVTGTTRLSDGMHSSQESPKNFCPPPEKVLGNGQAVDSSDKEPSIRRQDSFELRLPELPKIYVHSMDRQASKGSDPESPVSPLLTSDPKNERSHSQTFSRPDDQSDDLSVKVKEAKYTKHREPPSFWRLAQLSFAEWLYAVLGSIGAAIFGSFNPLLAYVIALVVTAYYRVDEGHHIRHEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVLIGMLLEWRLALVALATLPILMVSALAQKLWLAGFFAGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYKLKLNKIYTKSFLHGMAIGLAFGFSQFLLFACNALLLWFTAVSVKRGYMSLGTALKEYMVFSFAAFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNSALKPPNVYGSIELKNVDFCYPARPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERYYDPVAGQVLLDGRDLKQYNMRWLRSHLGLVQQEPIIFSTTIKENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTTGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGKIVEEGTHDSLVVKNGLYVRLMQPHFGKGLRQHRLI* 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00944 1402 Gene3D ABC transporter type 1, transmembrane domain 70 651 IPR036640 GO:0005524|GO:0016020
Pte5g00944 1402 PANTHER ABC TRANSPORTER B FAMILY 50 875 IPR039421 -
Pte5g00944 1402 FunFam ABC transporter B family member 6 770 998 - -
Pte5g00944 1402 Pfam ABC transporter transmembrane region 85 357 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte5g00944 1402 Pfam ABC transporter transmembrane region 835 1102 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte5g00944 1402 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1153 1390 IPR003439 GO:0005524
Pte5g00944 1402 FunFam ABC transporter B family member 20 1143 1392 - -
Pte5g00944 1402 MobiDBLite consensus disorder prediction 11 60 - -
Pte5g00944 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1142 1389 IPR027417 -
Pte5g00944 1402 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 373 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte5g00944 1402 MobiDBLite consensus disorder prediction 782 798 - -
Pte5g00944 1402 FunFam ABC transporter B family member 6 1000 1150 - -
Pte5g00944 1402 SUPERFAMILY ABC transporter transmembrane region 816 1138 IPR036640 GO:0005524|GO:0016020
Pte5g00944 1402 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 830 1122 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte5g00944 1402 Gene3D ABC transporter type 1, transmembrane domain 792 1050 IPR036640 GO:0005524|GO:0016020
Pte5g00944 1402 Gene3D ABC transporter type 1, transmembrane domain 1056 1142 IPR036640 GO:0005524|GO:0016020
Pte5g00944 1402 MobiDBLite consensus disorder prediction 761 781 - -
Pte5g00944 1402 Pfam ABC transporter 1171 1319 IPR003439 GO:0005524
Pte5g00944 1402 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 381 - -
Pte5g00944 1402 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 406 641 IPR003439 GO:0005524
Pte5g00944 1402 FunFam ABC transporter B family member 20 396 643 - -
Pte5g00944 1402 CDD ABC_6TM_Pgp_ABCB1_D2_like 819 1136 - -
Pte5g00944 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 640 IPR027417 -
Pte5g00944 1402 MobiDBLite consensus disorder prediction 756 798 - -
Pte5g00944 1402 Pfam ABC transporter 427 571 IPR003439 GO:0005524
Pte5g00944 1402 FunFam ABC transporter B family member 20 70 403 - -
Pte5g00944 1402 Coils Coil 252 272 - -
Pte5g00944 1402 SMART AAA_5 433 746 IPR003593 GO:0016887
Pte5g00944 1402 SMART AAA_5 1180 1367 IPR003593 GO:0016887
Pte5g00944 1402 MobiDBLite consensus disorder prediction 667 710 - -
Pte5g00944 1402 SUPERFAMILY ABC transporter transmembrane region 71 381 IPR036640 GO:0005524|GO:0016020
Pte5g00944 1402 Gene3D - 1143 1390 IPR027417 -
Pte5g00944 1402 Gene3D - 396 643 IPR027417 -
Pte5g00944 1402 MobiDBLite consensus disorder prediction 667 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00944 Pte-Chr5 27409453 27419937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00944 35 699 Calmodulin-binding Proteins AT2G36910 43.731 1.38e-168 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00944 K05658 - qsa:O6P43_005710 2415.19