Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00943 ATGGGGCAGAAGCAGCAACCATCCACTGCCAATCTGGACCATGAGCGCAAGAAGAAACGCCGTGTCGCATTCTCCAAACTCGATTGTGGAGTAGAAGCCAAAGACTGCATTAAAATCTTTCTGGTTTCAAGCAAAGAAGAAGTTGGTGCTGCCGACAGCTTTGCTATTGAACCGGTTGACTTGAATAGCTTTTTCGATGAAGATGGGAAAATATACGGTTACGAAGGGTTGAAGATTACTATCTGGATCAGCAGCGTATCTTTTCATTCATATGCTGATATTACATTCCAGAACACGTCTGATGGAGGCAGGGGGATAACAGACTTGAAAGCTTCCCTCCAGACAATTTTAGCTGAGACTTTAGTAGACAGTAAAGATGAATTTCTTCAAACTTTTTCGACAGAGCGCGGTTTTCTCCAATCTGCAGTGTCAAATGGGGAGATTGTGCAGCATAAGATTTCCAATGGACACATCAACTGTAATAGTTCCGAAGCATCTATTTTTAATGAAGAGGTTGTTCGCATGGTTGCTGGCAACATGGAAACCGGGCACCTTTATAGTCGTATCATACCCCTCGTTCTTCTTCTTGTTGATGGTAGCAGTCCAATTGATGTTACTGATCCAAGATGGGAGCTATATCTTCTAATTCAAAAGAAAGTTACTGAGCAGAAGGAATGTCGATTGATAGGATTTGCAGCAGTCTATCGTTTTTACCACTATCCTGATGGATCTCGTTTGAGATTGAGTCAGATACTGGTATTGCCCCCTTACCAGCGCAAAGGTTATGGGAGACATCTGCTATGCGTTCTAAATGATGTTGCTGTATCAGAAAATGTTTTCGATTTTACAATCGAAGAACCACTCAGTCAGTTGCAGTTTATCCGCACCTTTGTTGACACCCTTCGTTTGATTGAATTTAAGCCCATCCAGCAAGCAGTTGGTTCAGCTGTTTCACTTCTGAAACAGGGAAAGTTATCAAAGAAAGTACACAGTCCGAGACTACTGCCACCTTCTACTGCAATTGAGGAGGTTAGGAGAAGTTTGAAGATAAACAAGAAACAATTCCTTCAGTGTTGGGAGGTTCTGATCTATCTTAGCCTTAATCCTGCCGACAATGATATGAAAGATTTTGTGACCATTGTTTCAAATCGTATGAAGTATGATATATTCGGTAAGGATTCCAGTACTACTGGGAAGAGACTAACTGAAGTTCCAAGCGATTATGATGTTGAGATGTCATTTGTCATGTTCCGATCTGAGGCTAATGATTCCAGCAGTGTGCAAATAGATGACAATCAGCCAAACCAAGAAGAACAGCTCCAGAAGTTGGTTGAGGAAAGGGTGAAAGTGATCAAGTCGATTGCAGAGAAGTTATCCCTACAAAGTGTTCAAGCATAA 1398 0.417 MGQKQQPSTANLDHERKKKRRVAFSKLDCGVEAKDCIKIFLVSSKEEVGAADSFAIEPVDLNSFFDEDGKIYGYEGLKITIWISSVSFHSYADITFQNTSDGGRGITDLKASLQTILAETLVDSKDEFLQTFSTERGFLQSAVSNGEIVQHKISNGHINCNSSEASIFNEEVVRMVAGNMETGHLYSRIIPLVLLLVDGSSPIDVTDPRWELYLLIQKKVTEQKECRLIGFAAVYRFYHYPDGSRLRLSQILVLPPYQRKGYGRHLLCVLNDVAVSENVFDFTIEEPLSQLQFIRTFVDTLRLIEFKPIQQAVGSAVSLLKQGKLSKKVHSPRLLPPSTAIEEVRRSLKINKKQFLQCWEVLIYLSLNPADNDMKDFVTIVSNRMKYDIFGKDSSTTGKRLTEVPSDYDVEMSFVMFRSEANDSSSVQIDDNQPNQEEQLQKLVEERVKVIKSIAEKLSLQSVQA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00943 465 FunFam Histone acetyltransferase type B catalytic subunit 34 149 - -
Pte5g00943 465 CDD NAT_SF 227 267 - -
Pte5g00943 465 Gene3D - 34 198 IPR037113 GO:0006325
Pte5g00943 465 FunFam Histone acetyltransferase type B catalytic subunit 183 295 - -
Pte5g00943 465 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 28 365 IPR016181 -
Pte5g00943 465 Pfam Histone acetyl transferase HAT1 N-terminus 31 198 IPR019467 GO:0006325
Pte5g00943 465 Gene3D - 143 295 - -
Pte5g00943 465 PANTHER HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT 3 459 IPR017380 GO:0004402|GO:0005634|GO:0016573|GO:0031509
Pte5g00943 465 Pfam Acetyltransferase (GNAT) family 225 277 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00943 Pte-Chr5 27128860 27132270 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pte5g00943 Hat1_N 4.7e-22 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00943 K11303 - qsa:O6P43_007830 663.299