Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00940 ATGTTGGGTTCTAGCGCCTTGAATTTTGCTGGACAGAAGAAAACCGTTGTTGTTAGTGGAGATGATTACGGCTTGGGTAGGGAATTACTGAAGGTGCGCCATTTTGTGTCAAAGTCAATGTTGAAGGGTGGTAGGGTGATGGTTGATTGGTTGGTTGCAGGAATAGGAAGATGTAAACTTCGGCGAGTCCTTTCAGGTAAGGTTCACGGATCTTTGGCTCGTGCCGGTAAGGTCAGAGGTCAAACTCCCAAAGTGGCCAAGCAAGACAAGAAGAAGAAGCCGCGTGGCCGCGCACACAAGAGAATGCAGTACAACCGCAGATTTGTTACCGCCGTTGTTGGACCTGGAAAGAAGAGGGGACCTAATTCTTCCGAGAAGTGA 381 0.4882 MLGSSALNFAGQKKTVVVSGDDYGLGRELLKVRHFVSKSMLKGGRVMVDWLVAGIGRCKLRRVLSGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGPGKKRGPNSSEK* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00940 126 MobiDBLite consensus disorder prediction 74 103 - -
Pte5g00940 126 Pfam Ribosomal protein S30 67 123 IPR006846 GO:0003735|GO:0005840|GO:0006412
Pte5g00940 126 MobiDBLite consensus disorder prediction 86 103 - -
Pte5g00940 126 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 48 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00940 Pte-Chr5 26996207 26997851 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00940 66 127 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 95.161 3.29e-27 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00940 K02983 - csv:101222561 114.005