Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00938 ATGGGTAAGGTTCACGGATCTTTGGCTCGTGCCGGTAAGGTCAGAGGTCAAACTCCCAAAGTGGCCAAGCAAGACAAGAAGAAGAAGCCGCGTGGCCGCGCACACAAGAGAATGCAGTACAACCGCAGATTTGTTACCGCCGTTGTTGGACCTGGAAAGAAGAGGGGACCTAATTCTTCCGAGAAGTGA 189 0.5238 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGPGKKRGPNSSEK* 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00938 62 MobiDBLite consensus disorder prediction 22 40 - -
Pte5g00938 62 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 62 - -
Pte5g00938 62 Pfam Ribosomal protein S30 3 59 IPR006846 GO:0003735|GO:0005840|GO:0006412
Pte5g00938 62 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00938 Pte-Chr5 26963107 26964141 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00938 1 63 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 95.238 3.61e-29 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00938 K02983 - zof:121991985 114.775