Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00935 ATGGGAAGATCCCCATGTTGTGACAAGGCGAACGTGAAAAGAGGACCATGGTCTCCTGAAGAAGATGCCACCCTTAGGAATTACATTGAGGAACATGGCGCAGCTGGTAATTGGATCGCTCTGCCTCGTAAAGCAGGCCTTCATCGCTGTGGCAAGAGCTGCCGTTTGAGATGGCTCAACTATCTAAGGCCTGATATCAAGCTTGGTGGTTTTACGGAGGAGGAAGACAACATGATCTACTCTCTCTATAGCACCATCGGAAGTAGGCATGTTCACTCGAATCAACTTTTCATTCTCTTGTGGTCAGTTATAGCTGCCAAAATGCCTGGAAGGACAGATAATGATGTGAAGAACCATTGGAACACAAAGCTCAAGAAAAAGGTTTTGGCTGGAATAGTTTGCCTTCAGAATGACACTCCCCCTCCTGCTACGAGAAATCACAAAGGGTTAATGATTCATAATATTTCTCATTCTAGTGATGGGAACCAATTTGAGTCGTTGTCAAAGGGTAAAAGAATTTCGGATTTCAGCAACAGTCCAAGTAATCATCACAGCATCACATATTCAGATGAGTTTCCTAACTTCTCAGCTTCATCTTCTCTAGAGATGGACAAGGGTGATTCTTTATGGCTTGGCAACTGGGGAGTTGAAGAGCTTGCAAATTTGTTCGATCTTCAGTGTGGTTCCTTATATGATCCTTTCCGGCATGAATTTGGTTCTAAAGATAACATGCATCACTGA 741 0.4345 MGRSPCCDKANVKRGPWSPEEDATLRNYIEEHGAAGNWIALPRKAGLHRCGKSCRLRWLNYLRPDIKLGGFTEEEDNMIYSLYSTIGSRHVHSNQLFILLWSVIAAKMPGRTDNDVKNHWNTKLKKKVLAGIVCLQNDTPPPATRNHKGLMIHNISHSSDGNQFESLSKGKRISDFSNSPSNHHSITYSDEFPNFSASSSLEMDKGDSLWLGNWGVEELANLFDLQCGSLYDPFRHEFGSKDNMHH* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00935 246 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pte5g00935 246 Pfam Myb-like DNA-binding domain 71 122 IPR001005 -
Pte5g00935 246 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pte5g00935 246 PANTHER OS09G0431300 PROTEIN 1 181 - -
Pte5g00935 246 ProSiteProfiles Myb-like domain profile. 63 124 IPR001005 -
Pte5g00935 246 Gene3D - 7 68 - -
Pte5g00935 246 SUPERFAMILY Homeodomain-like 11 120 IPR009057 -
Pte5g00935 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Pte5g00935 246 CDD SANT 16 62 IPR001005 -
Pte5g00935 246 CDD SANT 71 124 IPR001005 -
Pte5g00935 246 SMART sant 13 64 IPR001005 -
Pte5g00935 246 SMART sant 67 126 IPR001005 -
Pte5g00935 246 FunFam Transcription factor RAX3 7 68 - -
Pte5g00935 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 128 IPR017930 -
Pte5g00935 246 Gene3D - 70 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00935 Pte-Chr5 26954942 26956041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00935 1 142 MYB Transcription Factor Family AT2G36890 68.310 1.48e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte5g00935 Myb_DNA-binding 8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00935 K09422 - nnu:104604454 229.565