Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00919 ATGGATATGCATCAAATTGAATGGCATGGTTGGAATAAGCATTGGCAACTGATTCAGTTCTGTTTCTTAGTTCTCATTTATCTCTCGTTGCTGGTTTACTTTAAGACTGATGAATTACAAGGAATCATGAATGACTTTGCTGAGCCTGGATCACTTGCTCCTTCTGGATTGTATCTCGGTGGCACAAAATATATGGTGATCCAAGGCAAGCCAGGAACTGTCATTCGTGGGAAGAAGGGTCCTGGAGGTGTTACCATTAAGAAGACCAATCAGGCCTTAATCATTGGCATCTATGGTGAACCTATGACTCCTGGTCAATGCAACATGATAGTTGAAAGGCTTGGTGATTATCTCATTGAACAGGATCTCTAA 372 0.414 MDMHQIEWHGWNKHWQLIQFCFLVLIYLSLLVYFKTDELQGIMNDFAEPGSLAPSGLYLGGTKYMVIQGKPGTVIRGKKGPGGVTIKKTNQALIIGIYGEPMTPGQCNMIVERLGDYLIEQDL* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00919 123 CDD PROF 34 122 IPR005455 GO:0003779
Pte5g00919 123 PRINTS Plant profilin signature 63 72 IPR005455 GO:0003779
Pte5g00919 123 PRINTS Plant profilin signature 44 58 IPR005455 GO:0003779
Pte5g00919 123 PRINTS Plant profilin signature 76 91 IPR005455 GO:0003779
Pte5g00919 123 PRINTS Plant profilin signature 96 109 IPR005455 GO:0003779
Pte5g00919 123 PRINTS Plant profilin signature 109 122 IPR005455 GO:0003779
Pte5g00919 123 Gene3D Dynein light chain 2a, cytoplasmic 27 122 - -
Pte5g00919 123 Pfam Profilin 35 122 IPR005455 GO:0003779
Pte5g00919 123 SMART prof_2 9 123 IPR005455 GO:0003779
Pte5g00919 123 SUPERFAMILY Profilin (actin-binding protein) 32 122 IPR036140 -
Pte5g00919 123 PANTHER PROFILIN 34 122 IPR005455 GO:0003779
Pte5g00919 123 PRINTS Profilin signature 56 70 IPR005455 GO:0003779
Pte5g00919 123 PRINTS Profilin signature 32 52 IPR005455 GO:0003779
Pte5g00919 123 PRINTS Profilin signature 105 122 IPR005455 GO:0003779
Pte5g00919 123 PRINTS Profilin signature 92 105 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00919 Pte-Chr5 24626100 24628610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00919 34 124 Cytoskeleton Gene Families AT2G19760 73.626 1.09e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00919 K05759 - tcc:18588488 167.933