Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00904 ATGCTTGAAAAAGAGTTCTTCACCGAGTATGGGGAGGCAACCCAATACGAAATTCAGGAGGTAGTCGGTAAAGGCAGCTATGGTGTGGTTGCGTCAGCAGTTGACACACATACTGGAGAGAAGGTAGCTATCAAGAAGATGAACAATGTGTTTGAGCATGTTTCTGATGCTACTCGCATTCTAAGGGAAATCAAGCTCCTTAGATTGCTGCGGCATCCTGATATTGTGGAAATAAAGCATATAATGCTTCCTCCATCTCGAAGAGAATTTAAAGATATATATGTTGTTTTTGAGTTGATGGAATCTGATCTTGATGAAGTCATCAAAGCAAATGATGACCTCACTCCAGAGCATTATCAATTTTTCTTGTACCAACTTCTCCGTGCCCTGAAATATATACATACAGCAAATGTTTTTCACCGCGATCTGAAACCAAAAAATATCCTTGCTAATGCTGACTGTAAACTGAAGATTTGTGACTTTGGACTTGCTCGTGTATCATTTACTGATGCCCCGTCTGCAATTTTTTGGACAGATTATGTGGCAACTCGTTGGTACCGTGCACCTGAACTCTGTGGCTGCTTTTTCTCCAAGTATACCCCTGCTATAGATATCTGGAGCATTGGATGTATATTTGCAGAATTGTTGACTGGGAACCCCTTATTTCCTGGGAAGAATGTGGTGCATGAATTGGAGCTCATTACTGATTTGCTTGGCACTCCATCAATGGATTGTATATGCAAGATTCGAAATGAAAAGGCTAGAAGATATTTATATGACATGAAGCACAAGCCATCAGTCCCTTTCTCAGAGAAATTCCCTCATGTAGATCCCTTGGCTCTTGATTTACTTGAGCGTATGCTATCATTTGATCCTAAAGACCGGCCATCTGCTGAAGATGCATTGGCCCACCCCTATTTTCATGGATTAGCAAATGTGGACTGCGAACCATCCAGAAGACCCATATCAAAATTAGAGTTTGAGTTTGAAAGGAGGAGATTGACAAAAGATGACGTGAGAGAACTGATCTATAGGGAGGTATGTCTTATATATTGCTTGATGAGGTTGCGTATTTACCTATTCCTTTGTGTTGGTTATGTTTTAGATGGCATCACATTAAACTTCAGAAGAAGACATAAAGCTTTCTTCCTATATGGAGAAGACTGTAACTGTAAAACCTTGATCTTTTAA 1191 0.4013 MLEKEFFTEYGEATQYEIQEVVGKGSYGVVASAVDTHTGEKVAIKKMNNVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLDEVIKANDDLTPEHYQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFTDAPSAIFWTDYVATRWYRAPELCGCFFSKYTPAIDIWSIGCIFAELLTGNPLFPGKNVVHELELITDLLGTPSMDCICKIRNEKARRYLYDMKHKPSVPFSEKFPHVDPLALDLLERMLSFDPKDRPSAEDALAHPYFHGLANVDCEPSRRPISKLEFEFERRRLTKDDVRELIYREVCLIYCLMRLRIYLFLCVGYVLDGITLNFRRRHKAFFLYGEDCNCKTLIF* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00904 396 Pfam Protein kinase domain 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00904 396 SUPERFAMILY Protein kinase-like (PK-like) 13 312 IPR011009 -
Pte5g00904 396 Gene3D Transferase(Phosphotransferase) domain 1 102 330 - -
Pte5g00904 396 FunFam Mitogen-activated protein kinase 102 330 - -
Pte5g00904 396 Gene3D Phosphorylase Kinase; domain 1 32 348 - -
Pte5g00904 396 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 314 - -
Pte5g00904 396 SMART serkin_6 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00904 396 ProSiteProfiles Protein kinase domain profile. 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00904 396 ProSitePatterns MAP kinase signature. 51 154 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pte5g00904 396 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524
Pte5g00904 396 FunFam Mitogen-activated protein kinase 5 111 - -
Pte5g00904 396 CDD STKc_TDY_MAPK 15 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00904 Pte-Chr5 24098335 24102970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00904 2 360 MAP Kinase Gene Family AT3G18040 83.287 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pte5g00904 Pkinase 2.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00904 - - atr:18439508 621.698