Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00890 ATGGTATTCATAATTGTAGGAACCTTAGTTGTCAGTGTCTTACTGGGTGTTCTTCTCTTGACCCAAAGAGACCACAAATCCGTCTTTACAGGGTATACAAAGACCGCTTATTCCAGCTCAAACGATGCAAACGTAAAGGTATCCAAAAGCTACAGTAAGGAAGAAGTGGCATTGCACAATAAGAGAACTGATTGTTGGATAATCATCAAGAACAAGGTTTATAATGTCACCTCATATGTAGACGAACATCCAGGGGGTGACTCCATTTTAGTGCATGCAGGGTATGATTCGACTGAAGGGTTTTATGGGCCACAACATGCAACACGAGTCTTTGACATGATTGAGGACTTCTATATTGGAGATCTGAGGCAGTAG 375 0.416 MVFIIVGTLVVSVLLGVLLLTQRDHKSVFTGYTKTAYSSSNDANVKVSKSYSKEEVALHNKRTDCWIIIKNKVYNVTSYVDEHPGGDSILVHAGYDSTEGFYGPQHATRVFDMIEDFYIGDLRQ* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00890 124 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 48 123 IPR001199 -
Pte5g00890 124 PRINTS Cytochrome B5 signature 110 122 IPR001199 -
Pte5g00890 124 PRINTS Cytochrome B5 signature 73 83 IPR001199 -
Pte5g00890 124 PRINTS Cytochrome B5 signature 83 97 IPR001199 -
Pte5g00890 124 Pfam Cytochrome b5-like Heme/Steroid binding domain 52 122 IPR001199 -
Pte5g00890 124 SMART Cyt_b5_2 51 123 IPR001199 -
Pte5g00890 124 FunFam Sulfite oxidase, mitochondrial 46 124 - -
Pte5g00890 124 Gene3D - 40 124 IPR036400 -
Pte5g00890 124 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 45 123 IPR036400 -
Pte5g00890 124 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 79 86 IPR018506 GO:0020037
Pte5g00890 124 PANTHER CYTOCHROME B5 39 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00890 Pte-Chr5 22817353 22819372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00890 3 122 NADPH P450 reductases AT1G60660 60.000 1.35e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00890 - - pvy:116108572 163.696