Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00876 ATGGCTTTACCGAGCCTATCTCTTTCCTTCACTGTTAGGAGGCGGCAACCGGAGCTAATAACTCCGGCTATACCAACTCCACGTAATCTAAAACATCTATCTGACGTTGATGACCAACCAGGTCTACGTTTCCAAACCCCACAGCTCCAAATGTATCCCTATAACCCTTCCATGCAACGAAATGACCCAGTTGAGGCCATTAGGAAAGCACTCTCGCAAGTTCTTGTGTTTTACTACCCTTTTGCTGGTAGGATGAGAGAAGAACCAAATGGAAAGCTGGTGGTGGATTGTACTGGTGAAGGTGTGTTGTTCATTGAAGCTGATGCTGATGTTACGCTTGAACAATTTGGTTATGCTCTTTATCCTCCATTTCCTGGTTGGGAAGAACTCGTCTACGATGTTCCTGGTTCTAGTGGGATCCTTGACTGCCCCTTGCTCTTAATTCAGGTTACTCGTCTCAAGTGTGGTGGTTTCATCTTCGCCTTTCGGCTCAACCACACGATGGCTGATGCATCGGGTATATGTCAGTTCATGCGTGCAATAGGAGAAATTGTTCATGGTGCTCAAATGCCGTCTGTTCAACCTATATGGTGTAGAGAGATCTTGACTGCAAGATTTCCACCTCGTATAACATGCATTCACCATGAGTACGATGAAGTTGCTTACGATATGAGTGCCATGGTCCCGCAAGAGGACTTGGTCCTTCGTTCTTTCTTTTTTGGTCCTTCTGAGATGTCAGCTTTAAGAAGTCTGAATCCTAATGATTCAACCAAATATTCAACATTTGAGCTGCTCGCAGCTTTCCTATGGCGATGCCGCACCATAGCCTTGCAGCCAAAGCCTGAGGAGGAAGTGCGTATAATATGCCTTGTCAAAGCGAGGTCATCCAAGTTCTTGCCAAAAGGATATTACGGCAATGCATTTGCATTCTCTGTTGCATTGACAACAACACAAAAGCTTTGTGAAAGTCCTTTGGTGTATGCAATGGAATTGGTGAGGCAGGCGAAGGCAAATGTCACAGAGGAATACATGAAATCAGTGGCTGATCTTATGGTTATCAGAGGTAGACCTCTATTTACAGTGGCTAGGTCTTATATTGTCTCAGATTTAACACATGCCGGATTCAATGATGTTGATTTGGGATGGGGCAAACCTGTATATGGTGGACCGGCTTTTGCTGGAGCTGTTCCAGATCTTGGAAGCTTCTTAATACCATTTAAGAATGGCGAGGGTGAGAGTGGATTAGTTGTACCTATTTGCTTACGTGCCTCTGCAATGGAAAGGTTCACGGTAGAAATCGACAAATTATTGGATGGGCATAGCAAATGCTTCGGAGGTCAGCACCGTTCCCATTTTATAACTTCAAACTTGTAA 1374 0.4461 MALPSLSLSFTVRRRQPELITPAIPTPRNLKHLSDVDDQPGLRFQTPQLQMYPYNPSMQRNDPVEAIRKALSQVLVFYYPFAGRMREEPNGKLVVDCTGEGVLFIEADADVTLEQFGYALYPPFPGWEELVYDVPGSSGILDCPLLLIQVTRLKCGGFIFAFRLNHTMADASGICQFMRAIGEIVHGAQMPSVQPIWCREILTARFPPRITCIHHEYDEVAYDMSAMVPQEDLVLRSFFFGPSEMSALRSLNPNDSTKYSTFELLAAFLWRCRTIALQPKPEEEVRIICLVKARSSKFLPKGYYGNAFAFSVALTTTQKLCESPLVYAMELVRQAKANVTEEYMKSVADLMVIRGRPLFTVARSYIVSDLTHAGFNDVDLGWGKPVYGGPAFAGAVPDLGSFLIPFKNGEGESGLVVPICLRASAMERFTVEIDKLLDGHSKCFGGQHRSHFITSNL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00876 457 Pfam Transferase family 12 433 - -
Pte5g00876 457 PANTHER ACYL TRANSFERASE 4 10 436 - -
Pte5g00876 457 Gene3D - 218 431 IPR023213 -
Pte5g00876 457 Gene3D - 9 217 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00876 Pte-Chr5 20917251 20920515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00876 12 433 Monolignol Biosynthesis Gene Families AT5G48930 29.663 1.91e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00876 K19861 - qsa:O6P43_030206 612.068