Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00842 ATGGCTGACAGTGAAGATGAATATGACCGTAAAAGACGAGATAAATTCCGTGGAGAAAGAACTGAATCTTACCGCAGTGGAGAAAGGCGAGAAGAAAGACGCGGTAGAGAAGACTGGATTGAAAGAGACTCCTGGTCTGGTCGAAGTCGTGGCGGTGGACGAGGGGATTATAGAGGTCCTGTTAGAGAAAGATACAGTCCTAGTCGATCACATGAACTCTCACCTCCTATGAAGCGGATGAGACATGACTGGGATGATATGGGAGACAGGCGGCTAGGCTATGAAGCAACAGCGTACAATTACAATGTTTGGGCCCCCCAAGCGCCTGTGCAAGCTTACTCCAATAGCCACAGAGCGGCTGCAGCTGTACCACCGCTGAGTGGAGGAGTGAGCATGGGTGAAATGCAAGACACTCAACCTCCAATGCTGTCCTTCAAATCTTTCCTCCAAACTCAAGATGACAACATTACGGACAATGACGCTATAAAAAAATACAATGAATACAAACATGAATTTCGCAGGCAACAACTCAATGAGTTCTTTGTTGCCCATAAAGAAGAAGAATGGTTTAAACTCAAGTATCATCCTGAAGATTCGGTGAAGAAAAAACAGGAGCATCAAGAAATGCTCAAAAGACGAATTGAAGTGTTCGAGGAATTCTTAGGTAATGGGCGTATTGACAAAGTGACGATTGACAGTGATCAAGCTGATAACTTGCAGAAGTTACTTGATGCAGTCGTAATCCGATTAGAAGGTGGCACTGACCTTGATCTGCAAGCCATTGACCAACCTCCAGAACCAGTTGCACCAGTCCAACGAATAACACTTGAAGCATCCAAGGTCGTGAAACAGGAAGTAGCTGAATCTAAAAACGAAAATGATGATGCAGAAGAAATTAAGAGTAGCGATAATCCTGATGCTGGGTCTGAACAAGTTGAAACTGCTAAGGTTAATGATGATGAAGAAAAACCAAAGTCTGTAGAGGAAGGCTCTGCTTCACCTGAAAAAGCCAGTGACGAGCCTGATGTCGCTGCAACAACTGAAGAAACAAAACCTCCATCTGAACCCCCAGCGTCACCAAAAAAAGATAAATCTGATGATGAAGGAGACGAAAAGAAATCTCCTCCTGTAGAAAATGGAGATACTGACGTAAAAATGGATACAGAGGAGGGCACAGCGGAAGTAAAAAGTAAATTGGAAGATTCCGAAGATGGCGAAAAATCTGAAGAAAAAGCAGAGAGCGAAACTACCAAGCAACAGGATAAGGAAGAAACTGAAGAATCAAAACAAGGAGTGGATCTTGAAGAAAAAGAAACGGTCGTAATAGAAGATTCCAGTGGAGAAAGTGGAGAGCTTGGTTTAAAAACTGATGAGAACAAAGAAGAGGACACCAAAACGGACGACAAACCAGAAGAGTTGAAACCGAGAGCCCTCCATAGAACATCCTCTCTCTTCCTGAGGAACTTAGCCCCTTCCATTACCAAGAAAGAAATCGAAGATCTTTGTAAACGGTACGCTGGATACCTAAGGACAGCAATAGCTGATCCGCAACCTGAAAGGCGGTGGTTCAGGCGAGGCTGGGTCACTTTCCAGAGAGATGTAAATATTAAGGAAATCTGTTGGCATCTCAATAATATTAGGGTACGTGACTGCGAACTTGGAGCTATTGTTAATCGAGATTTAAGTCGGAGGATACGAAGTGTCATGGGACTAACATCACTGAAACAAATCATTCGGAATGATATGAAACTAGCGGCAAACATAATTCAAAACTTGGATTCTCGCTCAAGCCTTTGGGTACCGGAGAATAAAGAACAACAGGAGGGTTATGGACTGAAATCATTGAATCCTGTGCTGCAGAATATCACTGATTACTTAATTGAAGAAGCGAGTGCCGAAGAAGAAGAACTTCTGGGTCAGTCATCAGAACCGGACGCGACAGAGGAAAAGGACATCAATCTTTTAAAGGTATTAGATAGATTGCTATTCTATCTACGAATAGTTCATAGCGTGGACTATTACAACCATTGTGAGTATCCCAACGAAGATGAAATGCCAAATAGATGTGGAATAATGCACACTCGTTCGCCTGCCCCCGCCAACAAGCCAACACAACAGGAAATCAGTGACTATTGTAAAAATTTCGAGGCCAAAATGCAGTCTCTGATTTTTCAACCTCCAGAACTAACAAATGAGGAACTTCAAATGTTGGGTGCGAAAGACACTGAGTCAGAGGTAGAGAAGTTTATTGCAGCTAATACTCAGGAACTGGCAACAGACAAATGGCTGTGCCCATTGTCAGGCAAGAAGTTCAAAGGTCCAGAGTTTGTCAGGAAGCACATCTTTAACAAGCATGCTGAGAAAGTAGAAGAAGTCAAAAAAGAGGTTGAATATTTCAACAATTACCTACGGGACCCCAAGAGACCTCAATTGCCAGAACACCCAGGGAACAAACAAATGAAAAAAGAGCCAGTTGCAGAAGTACCGCCTGCTTTTATTCCTCACATGCAGTATGGCTATGGAGGTTATCAACCTTATTCACGAGGTGGATATGGTGGATATGCCAGGCCAAGGGCGTACAATCGTGGCCGCGGGGGTGGAGACTATCGCCCGATAGTCCATTACAGAGACCTCGATGCTCCGCGAGAGCCAGATGAATTATTTAAATTTTTCATTGACTACTATCTCTGA 2691 0.4352 MADSEDEYDRKRRDKFRGERTESYRSGERREERRGREDWIERDSWSGRSRGGGRGDYRGPVRERYSPSRSHELSPPMKRMRHDWDDMGDRRLGYEATAYNYNVWAPQAPVQAYSNSHRAAAAVPPLSGGVSMGEMQDTQPPMLSFKSFLQTQDDNITDNDAIKKYNEYKHEFRRQQLNEFFVAHKEEEWFKLKYHPEDSVKKKQEHQEMLKRRIEVFEEFLGNGRIDKVTIDSDQADNLQKLLDAVVIRLEGGTDLDLQAIDQPPEPVAPVQRITLEASKVVKQEVAESKNENDDAEEIKSSDNPDAGSEQVETAKVNDDEEKPKSVEEGSASPEKASDEPDVAATTEETKPPSEPPASPKKDKSDDEGDEKKSPPVENGDTDVKMDTEEGTAEVKSKLEDSEDGEKSEEKAESETTKQQDKEETEESKQGVDLEEKETVVIEDSSGESGELGLKTDENKEEDTKTDDKPEELKPRALHRTSSLFLRNLAPSITKKEIEDLCKRYAGYLRTAIADPQPERRWFRRGWVTFQRDVNIKEICWHLNNIRVRDCELGAIVNRDLSRRIRSVMGLTSLKQIIRNDMKLAANIIQNLDSRSSLWVPENKEQQEGYGLKSLNPVLQNITDYLIEEASAEEEELLGQSSEPDATEEKDINLLKVLDRLLFYLRIVHSVDYYNHCEYPNEDEMPNRCGIMHTRSPAPANKPTQQEISDYCKNFEAKMQSLIFQPPELTNEELQMLGAKDTESEVEKFIAANTQELATDKWLCPLSGKKFKGPEFVRKHIFNKHAEKVEEVKKEVEYFNNYLRDPKRPQLPEHPGNKQMKKEPVAEVPPAFIPHMQYGYGGYQPYSRGGYGGYARPRAYNRGRGGGDYRPIVHYRDLDAPREPDELFKFFIDYYL* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00842 896 CDD RRM_SF 484 553 - -
Pte5g00842 896 MobiDBLite consensus disorder prediction 1 84 - -
Pte5g00842 896 MobiDBLite consensus disorder prediction 285 473 - -
Pte5g00842 896 SUPERFAMILY RNA-binding domain, RBD 478 553 IPR035979 GO:0003676
Pte5g00842 896 Pfam SERRATE/Ars2, N-terminal domain 146 255 IPR021933 -
Pte5g00842 896 Coils Coil 279 299 - -
Pte5g00842 896 MobiDBLite consensus disorder prediction 313 346 - -
Pte5g00842 896 MobiDBLite consensus disorder prediction 355 473 - -
Pte5g00842 896 Pfam Arsenite-resistance protein 2 695 866 IPR007042 -
Pte5g00842 896 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 883 IPR039727 GO:0006397
Pte5g00842 896 MobiDBLite consensus disorder prediction 285 304 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00842 647 809 C2H2 Transcription Factor Family AT2G27100 28.889 7.98e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00842 K27103 - btab:109042305 1599.33