Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00835 ATGGAGATTCCTGTAGCAGTTGCTGCGAAAATTGCAGAATATGTAGTGGCTCCAGTCAAACGGCAAGTGGAGTATCTAATTTGGTATGGGAAAAATGTGGAGGATTTGAGGAATAAGACAGAAAAGCTTCAAGAAGTAAGGGGCAGTGTGCAACGTTCAGTTGATACTGCCTGGAGAAATGGGGAGGAAATAGAATCAAGCGTTAAGAACTGGTTAGCAAAAGTGGACGAGATCATTGAAAATGTGGAATGCTTTCAAGATGATGAATGCCACAAAAGGGCTGGATGCAACAATTGGACATGCCCTAATTTATGGTCAAGACATCAGCTGAGTAGGAGGGCTAAGAAGATGACAGTTGGTGTTACTGAAATCCATGCGGAAGGGAAGTTTGATAAATTTTCTCATCGCACTTTCCCACAATGGATAGAAACAGCACCTACTGCCACAGGATATCAGGAATTTGATTCCAGAGTTTTGATTTTGAATGACATAATGGAGGCACTCAGAGATCCTACAGTAAACATGGTAGGAATATATGGGTTGGCAGGCGTCGGAAAAACCACTCTTGCCAAAGAACTTGCTAAGAAAGCTAAGGAGGACAAGTTATTCGATGTTGTAGCTATGGCAGTTGTATCACAGAAAATGGAGATTGACAAAATTCAGAAACACATTGCTGACATGTTAGGGCTGACATTTGAAGAAGAAAGTGAATTTATAAGAGCAGGCCGCCTAAGAGATAGAATTAAGCAGGAGAACAGTATCCTTGTGATTCTGGATGATCTCTGGGGAATGCTTGACTTGGCGAAGATAGGTATATCTTTCGATAACGATTACAAAGGCTGCAAGATTGTGCTAACATCAAGAAACCAAGAGGTACTATCAAGCCAAATGAATACTCAAAAGGAATTTGGACTAGGTGTCATGCCTAAAGAAGAGGCCTGGAATCTATTTATGGAGATGGCCGGACTTGATGGTTCTGACGAGAGCACTGAAATTTTGCCCGTAGCTGCTCAGGTTGCAGACGAATGTGCCGGATTGCCTGTAGCTATTGTTACTGTTGCAAGAGCATTGAGGAAGAAGAATTTAATTGAATGGAGGGATGCCCTGCGACAGCTTAAAAATCCCAAATATAGAAACATCACAGGCATGAAAGACAACGTTGATTCCTCCATAAAGTTGAGTTACGAGTATCTAGAAAGTGATGAGCTTAAGTCCATATTCTTGCTCTGTGCTACAATGGATAACGATGCTTCGGATGTGGATCTGTTGAAATATTGTGTGGGATTGGGGTTATTTAAAGGCATATATAAAATAGATGAAGCACGGGACAGGTTACACACATCTATTCAGAAGCTAAAAGCCTCATGTCTGTTGCTAGACAGTACTTATAGCGATCGATTTAACATGCACGACGTTGTTCGTGATGTTGCCTTGTCTTTAGCATCTGAAATTCAACATGCATTTACAGTCAGATATGACAAACTTTACGAATGGCCAGATACGAGTGACCTGGAAAATTGCTCCATGATTACTTTAGATTTTAGTGATGTATGTGAGCTGCCTCAGATGATAGACTGTCCAACTGTCAAATTTTTCCGTATTTACAGTAATGATCGCTCTATGGTAATATCTGAAAATTTCTTCCGGGGACCTTTCTGGACTCAGAGTGTTGGATTTGACAGAAATGCATCTTTCTACTCTGCCTTCTTCAGTCACATCCTTGAGGAATCTTCGAACGTTATGCCTAGATTGTGGTGTGCTAGAAGACATAGCCTTAATTGGAGAGCTAACTGGCTTGAAAATTCTAAGCCTTTTACGTTCCGACATCAAACAACTGCCACGTGA 1845 0.4119 MEIPVAVAAKIAEYVVAPVKRQVEYLIWYGKNVEDLRNKTEKLQEVRGSVQRSVDTAWRNGEEIESSVKNWLAKVDEIIENVECFQDDECHKRAGCNNWTCPNLWSRHQLSRRAKKMTVGVTEIHAEGKFDKFSHRTFPQWIETAPTATGYQEFDSRVLILNDIMEALRDPTVNMVGIYGLAGVGKTTLAKELAKKAKEDKLFDVVAMAVVSQKMEIDKIQKHIADMLGLTFEEESEFIRAGRLRDRIKQENSILVILDDLWGMLDLAKIGISFDNDYKGCKIVLTSRNQEVLSSQMNTQKEFGLGVMPKEEAWNLFMEMAGLDGSDESTEILPVAAQVADECAGLPVAIVTVARALRKKNLIEWRDALRQLKNPKYRNITGMKDNVDSSIKLSYEYLESDELKSIFLLCATMDNDASDVDLLKYCVGLGLFKGIYKIDEARDRLHTSIQKLKASCLLLDSTYSDRFNMHDVVRDVALSLASEIQHAFTVRYDKLYEWPDTSDLENCSMITLDFSDVCELPQMIDCPTVKFFRIYSNDRSMVISENFFRGPFWTQSVGFDRNASFYSAFFSHILEESSNVMPRLWCARRHSLNWRANWLENSKPFTFRHQTTAT* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00835 614 Gene3D - 142 304 IPR027417 -
Pte5g00835 614 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 19 547 - -
Pte5g00835 614 Gene3D - 308 398 IPR042197 -
Pte5g00835 614 PRINTS Disease resistance protein signature 248 262 - -
Pte5g00835 614 PRINTS Disease resistance protein signature 175 190 - -
Pte5g00835 614 PRINTS Disease resistance protein signature 343 357 - -
Pte5g00835 614 SMART AAA_5 172 376 IPR003593 GO:0016887
Pte5g00835 614 FunFam Probable disease resistance protein At1g61300 154 302 - -
Pte5g00835 614 Pfam NB-ARC domain 163 396 IPR002182 GO:0043531
Pte5g00835 614 CDD AAA 157 287 - -
Pte5g00835 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 410 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00835 Pte-Chr5 18482896 18485669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00835 173 450 WRKY Transcription Factor Family AT5G45050 27.907 4.45e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00835 - - qsa:O6P43_032552 614.764