Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00832 ATGAACCTGTGGTTTCCAATAGTTTTAAAGCCGCATTTAGAAGTCTTCCTTGACTCTACAAAGATTACTTACAAAACCCTAAATCCGCTCCTGAAACCTCCTCCTCCAATTGAAGGCACCTACGTTTGTTTTGGATCCACCTACACTACTGATGATGTGCTACCAAGCCTAGAAGAGCAGGGAGTGCGCCAGCTGTACCCAAAAGGATCTAATGTGGAGCTTGCTGATATTCTTGTTGAGAGGCCATCACAATATGCAAGAAGAGTGGAAGATATATCTGTTATATTCAAGAACTTGCATCACCTTCTAAATTCACTACGACCTCACCAGGCAAGAGCAACACTAATTCACATTCTAGAACTCCAAATACAACGACGGAAACAAGCTATTGAGGATATCAAGAGGTATCCTGTTTCAAAACCTTCCATAGATGTTTAA 438 0.4132 MNLWFPIVLKPHLEVFLDSTKITYKTLNPLLKPPPPIEGTYVCFGSTYTTDDVLPSLEEQGVRQLYPKGSNVELADILVERPSQYARRVEDISVIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAIEDIKRYPVSKPSIDV* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00832 145 Gene3D - 70 138 IPR044888 -
Pte5g00832 145 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 32 72 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pte5g00832 145 SUPERFAMILY Mediator hinge subcomplex-like 72 136 IPR037212 GO:0016592
Pte5g00832 145 Pfam MED7 protein 72 135 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pte5g00832 145 Pfam MED7 protein 23 68 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00832 Pte-Chr5 18184470 18187210 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Pte5g00832 Med7 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00832 K15148 - tcc:18599197 190.66