Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00831 ATGGCTACTGCAATGTACCCACCTGCGCCTCCTTTCTATAGACTCTACAAAGATTACTTACAAAACCCTAAATCCGCTCCTAAACCTCCTCCTCCAATTGAAGGCACCTACGTTTGTTTTGGATCCACCTACACTACTGATGATGTGCTACCAAGCCTAGAAGAGCAGGGAGTGCGCCAGCTGTACCCAAAAGGATCTAATGTGGATTTCAAGAAAGAACTAAGGTCGCTTAACAGAGAATTGCAATTGCACGTCCTAGAGCTTGCTGATATTCTTGTTAAGAGGCTATCACAATATGCAAGAAGAGTGGAAGATATATCTGTTATATTCAAGAACTTGCATCACCTTCTAAATTCACTACGACCTCACCAGACTAGTAACTATTATGTTACTGATGATGACTCTGCTACTGTACGTATAGTCTTGAACGTAATTTCTAAGAGTTTTATAATTTTCATCCCAATTCCACGGGGTCGTTCTCCAGTATGGTTTTCTTCACAATTCAAAAGCATCATCATCTTCTACGCTGGTACAGAGTTCACAATGGCCATAGAGCGTTTCGTGTACACTCGAGAAAGTGAATGCGTTTTAGTAGAGATGCACAGAATGAATCAATCTCAACTGTACAATATAATCTAA 639 0.4053 MATAMYPPAPPFYRLYKDYLQNPKSAPKPPPPIEGTYVCFGSTYTTDDVLPSLEEQGVRQLYPKGSNVDFKKELRSLNRELQLHVLELADILVKRLSQYARRVEDISVIFKNLHHLLNSLRPHQTSNYYVTDDDSATVRIVLNVISKSFIIFIPIPRGRSPVWFSSQFKSIIIFYAGTEFTMAIERFVYTRESECVLVEMHRMNQSQLYNII* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00831 212 Pfam MED7 protein 25 127 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pte5g00831 212 Gene3D - 61 129 IPR044888 -
Pte5g00831 212 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 125 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pte5g00831 212 SUPERFAMILY Mediator hinge subcomplex-like 67 129 IPR037212 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00831 Pte-Chr5 18174636 18180208 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Pte5g00831 Med7 4.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00831 K15148 - mnt:21397210 225.328