Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00821 ATGAAGGAAACACCAAGCCCCCATAATCTGCACTCAAGCCAAAGGCGTCTCATGTCTACCAGCTACTATGCTTCTCCCCACAGTGTCAAGAACAAAGACAAGACTGCCTCTATCTTCAACCACATAGCTGCAGCTGCTAAGAAAGTTGCTGTAGTTTTGACTGTCATTTTCTATGGGAAAAGAAAATCAGGTACAAGGCTTGCTGCAACAGAGGGCAGAAGAAACAGCAATCAAGTCAAAGGGGTGTCATTTTCAACAGATCTTTCATCTGGAAGTAATACTACAAAGAGTTCATGGAAATCAAAGTCTTCTAGTTCCTATTCATCGTTTAGTACTGTGGGCAGTGGACAATTAGGACTAGGGAACTTCACACTGGATGAAGTTTATAAGGCAACAGGAAAATTCTCTCAAGATAATATCATTGGCGAAGGTGGCTTTGGAATTGTATACAAGGGAAAGCTAAGGGATGGTACTGTTGTCGCTGTCAAGCGTGCCAAAAAGAGCACAAATCAAAAGCGCTTGTCTGAGTTTAAGAATGAAATAATTACTTTATCAAAGATTGAGCATCTGAATCTGGTGAGGCTTTACGGGTATTTGGAGGAAGGAGATGAACAGATCATTGTGGTTGAACATGTTGGCAATGGAACTCTTCGGGACCACATAGATGGTATCGGTGGAAATGAGCTTGAACTTTCAGAGCGTTTGGATATAGCAATTGATGTTGCTCATGCAATTACTTATCTCCATATGTACACAGATCCTCCCATAATCCACAGAGATATCAAGGCATCAAACATTCTTATCACAGATAAACTAAGGGCTAAAGTAGCAGACTTTGGATTTGCACGTTTGGTTGCAGAAGACCCTGATGTGACTCACATCTCAACTCAAGTGAAAGGGACAGCTGGCTACTTGGATCCTGATTACCTTCGTACATATCAACTCACTGATAAGAGTGATGTCTACTCTTTTGGAGTTGTGCTTGTAGAAATGGTGACAGGAAGACATCCTTTAGAGCCAAAGAGATCAATAAAGGAACGAGTCACAATTAAATGGGCAATGAAATTGTTGAAAGAAGGGGATGTTGTGCTTACCATGGATCCAAAGCTGCGAAGGAGTCCAGCATCCATCTGTGCAGTGGAGAAAGTTCTGTACCTGGCCTTAGAATGTCTGTCACCTACAAGACTGTCCAGACCATCCATGAAAAGATGTGCAGAGGTACTATGGAGCATTAGGAAAGAGTTTAGAGAAGGAGCAGCTTTGTCTTAG 1269 0.4208 MKETPSPHNLHSSQRRLMSTSYYASPHSVKNKDKTASIFNHIAAAAKKVAVVLTVIFYGKRKSGTRLAATEGRRNSNQVKGVSFSTDLSSGSNTTKSSWKSKSSSSYSSFSTVGSGQLGLGNFTLDEVYKATGKFSQDNIIGEGGFGIVYKGKLRDGTVVAVKRAKKSTNQKRLSEFKNEIITLSKIEHLNLVRLYGYLEEGDEQIIVVEHVGNGTLRDHIDGIGGNELELSERLDIAIDVAHAITYLHMYTDPPIIHRDIKASNILITDKLRAKVADFGFARLVAEDPDVTHISTQVKGTAGYLDPDYLRTYQLTDKSDVYSFGVVLVEMVTGRHPLEPKRSIKERVTIKWAMKLLKEGDVVLTMDPKLRRSPASICAVEKVLYLALECLSPTRLSRPSMKRCAEVLWSIRKEFREGAALS* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00821 422 SMART serkin_6 135 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00821 422 ProSiteProfiles Protein kinase domain profile. 135 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00821 422 Gene3D Transferase(Phosphotransferase) domain 1 212 420 - -
Pte5g00821 422 Pfam Protein kinase domain 136 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00821 422 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 212 421 - -
Pte5g00821 422 MobiDBLite consensus disorder prediction 69 106 - -
Pte5g00821 422 ProSitePatterns Protein kinases ATP-binding region signature. 141 167 IPR017441 GO:0005524
Pte5g00821 422 SUPERFAMILY Protein kinase-like (PK-like) 110 411 IPR011009 -
Pte5g00821 422 MobiDBLite consensus disorder prediction 67 106 - -
Pte5g00821 422 PANTHER OS01G0750732 PROTEIN 28 413 - -
Pte5g00821 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Pte5g00821 422 FunFam receptor-like protein kinase FERONIA 92 211 - -
Pte5g00821 422 Gene3D Phosphorylase Kinase; domain 1 92 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00821 Pte-Chr5 17195061 17197528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00821 128 411 Receptor kinase-like Gene Family AT5G59700 45.645 1.33e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pte5g00821 Pkinase 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00821 - - gmx:100811511 509.605