Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00792 ATGGAGATAGAAGTTGCAAAGGGTGGTGGTAACAGAGGCTGTAGTGGAAACAGCAGCAGCAGCAGCGGCGGTGAGGAAGGTGTCTCACATGGAAGAGTGGAGAGGGGTGCTTACTTGGTGTGGGAAGATTTGAGTGTGGTAATTCCTAACTTTGGGAAAGGACCAACCAAGAGATTGCTTAATGGACTTAGTGGGTATGCAGAACCTGGTAGGATTATGGCTATCATGGGTCCTTCTGGTTCTGGGAAGTCTACTCTACTTGATTCACTTGCAGGTAGACTCTCAAGAAATGTGGTCATGACTGGGAATATTCTTCTGAATGGGAAGAAAAGGCGGCTGGAATATGGGACTGTTGCTTATGTGACTCAAGAGGATGTACTGTTGGAGACGCTCACAGTCAGGGAAACCATATCATACTCAGCACGCCTCCGGCTTCCGAATTCGATGGCTCGAGAGGATGTCAATGACCTGGTAGAAGGAACAATCATGGAAATGGGTCTCCAAGATTGTTCAGATAGGTTGATTGGAAATTGGCACTCAAGAGGCATTAGTGGAGGAGAGAAGAAAAGGCTTAGTATTGCACTGGAAATACTGACAAGGCCTCAATTACTATTCCTTGATGAACCAACCAGTGGACTTGATAGTGCATCAGCTTTCTTTGTAGTTCAGACACTGAGAAATGTCGCCCGTGACGGCAGAACAGTTATATCTTCAATCCACCAGCCAAGTAGTGAAGTATTTGCACTCTTTGATGACCTTTTCTTACTGTCTAGTGGTGAGACTGTCTATTTTGGAGAAGCAAAAATGGCAATAGAGTTCTTTGCAGAAGCAGGTTTTCCATGCCCGCGTAAAAGAAATCCTTCTGATCACTTCCTGCGCTGTATCAATTCAGACTTTGATGTTGTAACAGCCACATTGAAAGGGTCTCAAAGAATTAGGGATGTCCAAAATTCTGCAGACCCTTTCATGAATCTGGCTACTGCAGAGATCAGAGAAAAGCTTGTTGAAACTTACAGGCGTTCAAAGTATGCCAAAAGGACGCGAGAGAGGATCAAAGAACTGTCAACAATTGAAGGAGATGCAATTGAAATCAGAAGTGCAAGCCAAGCAAGTTGGTTGAAACAGCTTACAACGTTGACAAGGAGATCTTTTGTGAACATGTCAAGAGATGTTGGATATTACTGGTTGAGGATCATAATCTACATACTTGTATCTATATGTGTGGGGACAATCTATTTTAATGTTGGTTACAGCTATACTTCTATCCTAGCTAGGGCAGCTTGTGGTGCATTCATATCAGGCTTCATGACATTCATGTCAATAGGAGGCTTTCCATCCTTTGTTGAAGAAATGAAGGTCTTTCATCGCGAAAGGCTCAATGGATACTATGGGGTTTCAGTGTTTATTTTGTCAAACTTTCTATCTTCATTCCCTTTCTTGATTGCAATTGCACTTGTAACTGGGACCATCACTTTTACTATGGTGAAACTTAGATCAGGGTTCTCATATTATGTGTTCTTCACATTGAACATCTACTGTTGCATCTCTGTAGTAGAGAGCCTCATGATGGTCATAGCTTCACTTGTTCCAAATTTCCTCATGGGGATTATTACTGGTGCTGGCGTAATTGGTATCATGATGATGACTTCTGGGTTCTTTAGGTTGCTTTCGGATCTACCCAAGCCATTTTGGCGCTACCCAATTTCTTATATTAGTTATGGCTCATGGGGGCTACAGGGAGGCTCCAAGAATAGCTTACTTGGACTTGATTTTGATCCACTGGTACCTGGTGAACCGAAATTGAGTGGAGAGTATATCCTTACAAACATGTTGGGGATGTCAGTTAGTCATTCGAAGTGGTGGGACTTGACTGCCCTATTTGCCCTTCTAATTGCATATAGACTTCTTTTCTTCATTATCATGAAATTAAAGGAGAGGGCTACACCATTCTTTCAATCAATCTATGCCAAGAAAATCATTAGACATCTTGAGAAAAGGCCTTCATTCAGAATTCAGAAGACACCTTCTTTCAGGACTATGGGATCCTTCTCCTCTAAAAGGCATCAACCCCATCATCCATTATCTTCTCAAGAAGGTCTTACCTCACCTCTCCAATAG 2118 0.4259 MEIEVAKGGGNRGCSGNSSSSSGGEEGVSHGRVERGAYLVWEDLSVVIPNFGKGPTKRLLNGLSGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSRNVVMTGNILLNGKKRRLEYGTVAYVTQEDVLLETLTVRETISYSARLRLPNSMAREDVNDLVEGTIMEMGLQDCSDRLIGNWHSRGISGGEKKRLSIALEILTRPQLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSSGETVYFGEAKMAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIRDVQNSADPFMNLATAEIREKLVETYRRSKYAKRTRERIKELSTIEGDAIEIRSASQASWLKQLTTLTRRSFVNMSRDVGYYWLRIIIYILVSICVGTIYFNVGYSYTSILARAACGAFISGFMTFMSIGGFPSFVEEMKVFHRERLNGYYGVSVFILSNFLSSFPFLIAIALVTGTITFTMVKLRSGFSYYVFFTLNIYCCISVVESLMMVIASLVPNFLMGIITGAGVIGIMMMTSGFFRLLSDLPKPFWRYPISYISYGSWGLQGGSKNSLLGLDFDPLVPGEPKLSGEYILTNMLGMSVSHSKWWDLTALFALLIAYRLLFFIIMKLKERATPFFQSIYAKKIIRHLEKRPSFRIQKTPSFRTMGSFSSKRHQPHHPLSSQEGLTSPLQ* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00792 705 Pfam ABC transporter 60 211 IPR003439 GO:0005524
Pte5g00792 705 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524|GO:0016887
Pte5g00792 705 FunFam ABC transporter G family member 11 33 277 - -
Pte5g00792 705 MobiDBLite consensus disorder prediction 1 29 - -
Pte5g00792 705 SMART AAA_5 69 240 IPR003593 GO:0016887
Pte5g00792 705 CDD ABCG_EPDR 36 265 - -
Pte5g00792 705 Gene3D - 31 274 IPR027417 -
Pte5g00792 705 Pfam ABC-2 type transporter 375 581 IPR013525 GO:0016020|GO:0140359
Pte5g00792 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 273 IPR027417 -
Pte5g00792 705 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 33 666 - -
Pte5g00792 705 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 283 IPR003439 GO:0005524
Pte5g00792 705 MobiDBLite consensus disorder prediction 679 705 - -
Pte5g00792 705 MobiDBLite consensus disorder prediction 12 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00792 Pte-Chr5 15024651 15030798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00792 55 252 Calmodulin-binding Proteins AT2G36910 30.137 5.59e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00792 K05681 - qsa:O6P43_013934 1090.87