Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00760 ATGCCTCATCTACGGTTTGGGGCCTACAAATATGTCCAAGAGCTTTGGCGGAAGAAGCAGTCTGATGTAATGAGGTTCCTGCAGCGGGTTAGGTGCTGGGAGTATCGTCAACACCCATCCATTGTTCGTCTTACAAGACCTACTCGCCCTGACAAGGCTCGTCGCTTGGGTTACAAGGCCAAGCAGGGTTATGTCGTCTACCGTGTCCGAGTCAGGAGAGGTGGAAGAAAGAGGCCAGTTCCCAAGGGTATTGTGTATGGGAAGCCCACTAACCAAGGTGTGACTCAATTGAAGTTTCAGCGAAGCAAGAGGTCTGTTGCTGAGGAACGTGCTGGCAGGAAGTTGGGTGGCCTAAGGGTTCTCAATTCTTACTGGATTAATGAGGATTCTACCTACAAGTACTTTGAGGTAATCCTGGTGGATGTGGCTCACAATGCTATTCGCAATGACCCGAGAATCAATTGGCTTTGCAATGGAGTCCACAAGCACAGGGAGCTGCGTGGCCTCACTTCTGCTGGTAAGAAATACAGGGGACTACGTGGCAGGGGACATCTCTACCACAAGGCACGTCCATCTCGCAGGGCAACCTGGAAGAGAAACAACACACTTTCTCTTCGTCGTTATCGTTAA 630 0.5048 MPHLRFGAYKYVQELWRKKQSDVMRFLQRVRCWEYRQHPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDVAHNAIRNDPRINWLCNGVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00760 209 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 200 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pte5g00760 209 SMART Ribosomal_L15e_2 7 198 IPR000439 GO:0003735|GO:0005840|GO:0006412
Pte5g00760 209 FunFam Ribosomal protein L15 6 209 - -
Pte5g00760 209 ProSitePatterns Ribosomal protein L15e signature. 51 74 IPR020925 GO:0003735|GO:0005840|GO:0006412
Pte5g00760 209 Gene3D Ribosomal protein l15e 6 209 IPR024794 GO:0003735|GO:0005840
Pte5g00760 209 PANTHER RIBOSOMAL PROTEIN L15 7 209 IPR000439 GO:0003735|GO:0005840|GO:0006412
Pte5g00760 209 Pfam Ribosomal L15 7 195 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00760 Pte-Chr5 12693320 12694715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00760 6 210 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 89.756 8.31e-124 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00760 K02877 - zju:107415665 389.808