Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00754 ATGCAAAACCCTAGAAGCCGACTAACTTGGGTCTTCACTACTTGGTTGCAGTTTCTTCGATTTGTCTTCTCCAATGGATGGAAACCATCAAATATAATCATGCCTCATCTACGGTTTGGGGCCTACAAGTATGTTCAAGAGCTATGGAGAAAAAAGCAGTCCGATGTCATGAGATTTTTGCAGAGGGTTAGGTGCTGGGAATATCGTCAGCACCCATCAATTGTGCGTCTTACAAGGCCTACTCGCCCTGACAAGGCTCGCCGCTTGGGATACAAAGCCAAGCAGGGTTATGTCGTCTACCGTGTCCGAGTCAGGAGAGGTGGAAGAAAGAGGCCAGTTCCCAAGGGTATTGTGTATGGGAAGCCCACTAACCAAGGTGTGACTCAATTGAAGTTTCAGCGAAGCAAGAGGTCTGTTGCTGAGGAACGTGCTGGCAGGAAGTTGGGTGGCCTAAGGGTTCTCAATTCTTACTGGATTAATGAGGATTCTACCTACAAGTACTTTGAGGTAATCCTTGTGGATGTGGCTCATAATGCCATTCGCAATGACCCTAGAATCAATTGGCTCTGTAATGGTGTCCACAAGCATAGAGAACTTCGTGGCCTTACTTCTGCTGGAAAGAAATACAGGGGATTGCGTGGCAGGGGACATCTTTACCACAAAGCCCGTCCATCTCGCAGGGCAACCTGGAAGAGGAACAACACTCTTTCACTTCGTCGCTACCGTTAA 729 0.4787 MQNPRSRLTWVFTTWLQFLRFVFSNGWKPSNIIMPHLRFGAYKYVQELWRKKQSDVMRFLQRVRCWEYRQHPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDVAHNAIRNDPRINWLCNGVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00754 242 Pfam Ribosomal L15 40 228 IPR000439 GO:0003735|GO:0005840|GO:0006412
Pte5g00754 242 Gene3D Ribosomal protein l15e 39 242 IPR024794 GO:0003735|GO:0005840
Pte5g00754 242 FunFam Ribosomal protein L15 39 242 - -
Pte5g00754 242 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 39 233 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pte5g00754 242 ProSitePatterns Ribosomal protein L15e signature. 84 107 IPR020925 GO:0003735|GO:0005840|GO:0006412
Pte5g00754 242 SMART Ribosomal_L15e_2 40 231 IPR000439 GO:0003735|GO:0005840|GO:0006412
Pte5g00754 242 PANTHER RIBOSOMAL PROTEIN L15 40 242 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00754 Pte-Chr5 12564255 12566191 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00754 39 243 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 89.756 6.52e-123 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00754 K02877 - zju:107415665 389.808