Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00719 ATGGGTGACATGGTTGTAGTTAAGTATGTGTTGGGACCAATATTTAAGGAATTGATGACGGCAGTGTTGGATGCAGGAAAGAGAGTTGCCAAGTTCAAGCCTGCCCTTGATAAGTTAAAGACCACGTTAGACGCTTTAAAACCTGTAATCGAAGAAATTGATCAACTTTACAACCAGCAAGATCGAGCTCATGAAATAGAGCAGCTGAATAAAATCATGAACAACGGGGTGGAGCTTGTTCGAAATTGCTTGGGATTGTCTTGGTGGAAACTGATTTCCAAGTGGACGTACCAGGATGAACTTACCAAATTGGAGGAGTCACTTCGGGGATTTGTATCCTTTGATTTTACCCTTCAGATGGGAAGGAATGTACTGGAGTTGCAAACGAGAACGCGCAATCAAAGTTTTGTTTTTTCATGCAGGCCTCCGAAGCCTCCACAGTTTACTGTTGGGCTGGATGTGCCTTTGAAAGAATTAAAGATGCGGCTGTTCAACGATGCAAGCTCAGTCCTGGTCTTGTCTGCTGCTCCAGGATTCGGGAAGACCACATTGGCCAGAAAGCTTTGTTGGGATGAGGAAGTAATAGACAAATTCAAGGAGAATATCTTCTTTGTCACGTTTTCGCAAAATCCAAAGTTGAGTGTCATAGTTGCGAAACTATTACAAAGTGGTTATGAGCTGGAGCAAAAATTTTCGAGCGACGAAGATGCAATTAACCAGTTGGAAACTGCATTGCGACATATGAAGAAAGGTCCAATATTACTGGTGATAGATGATGTATGGTCTTACTCAGAAATACTAGTGAAAAAATTTGAGTTCCAGTTGCCAGATTATAAGATCCTGGTGACCTCAAGATTTAAATTAGAGAGGTTTGGTACTCCATTCTGCTTGGAACCGCTACATGATCAAGAGGCAATAGCTCTTTTCCGTCATGCTGTATCCTTGGATGGCAGTAGCTACTCCTATCAGCTTGAAGAAAATGAGGCGAAGATAGTTAAAGCTTGTGGGGGTTGCCCTTTTGCTCTTGAAGTAATTGGTGGATCATTGCGTCTGCAATCTCCTGAGACCTGGCAACGTATGGTGAGGGAACTATCAAAAGTTCATTATATTTTGGAGTCCGACGAAAATTTGCTTAGATATTTGCTGAAGAGCTTAGATGTACTCGGCGGAAAGGTCAATCTCAAGGAGTGTTTTGTAGACCTTGGTTTATTTCCCGAGGACCAAAGAATTCCTGCTTCTGCCCTCATTGATATGTGGGTAGAATTGCATGAGTTAGATGAAGATGGCGTTACTGCAATGAACTATATTTGGGAACTGAGCAAATGTAATTTGGCAAAGGTTGCAGTCACGAGGAAACTTCCATTGAACGAAGGTAACTACTATAGCAGATATTTTGTCACACAGCATGATATACTTAGAGCGCTAGCCATCCGTCAGAGCAGCCAGGGGGCAGTTGAACGAAGGAAAAGACTGGCAATTGATTTAAGTGGAGAGAATGTACGTAAGTGGTTGATAGAAGAGCATCAGCAGGAGCTTGCGGCTCAAATATTGTCAATATCAACAGATGAAAAAACTTCAAGCTGGTACGCCATTGAGCCATCCAAAGCTGAGGTACTAATTTTGAACCTTTGGGCAGAGGAGTACAGTTTACCGGAGTTCATGAACAAAATGTGTAAATTAAAAGTTCTCATAATGACCAACTATGGTTACAGTCTTCTTGAGTTGAAAAATTTTGAATTGCTTAGCTCTTTGCCCAATTTGAAAAGAATCAGGCTAGAGCAAATTTCACTTCCGGCCTACGACGCACCTTTGCTATTAGAGAACTTGAGAAAATTATCACTGTTTATGTGCAACACGACTCAAGCAATTGGAGGAATAGCCAATATTTCTTTAGTGATGCCAAATCTTGTTGAGATTAACATTGACTATTGCAATGATATTATCAAATTGCCTGCTAAGCTTTTCGACAGTGTGCACTTAGAGAGGTTGAGTATCACTAATTGTCACAAGCTTTCTCTGCTTCCTGAGGAGATTGGAAAGGCCAAGAATCTGCAAATATTGAGGCTTGCTTCCTGTACTGATTTAGAAGAGTTGCCAGAATCAATTGTTGATCTTGATCAACTGAAACTTCTTGATATCTCAGACTGCATAAATGTTGAAACTTTGCCAGAAAAAATGGACAAGCTGTGTAATTTGAGAACACTCTGCATAGCTGGTTGCTCAAAGTTGATTGAATTGCCATCCACTGTTGAGGATCTAAACTTAAAGGATATTGTATATGATGAACAGACTTCTGGTTTATGGGAACGATTCAAGTCTGTCCTCACGAGTGTAAGGATTCATGAGCGTAAGGTGGAAATCAGCTTCGATTAG 2373 0.41 MGDMVVVKYVLGPIFKELMTAVLDAGKRVAKFKPALDKLKTTLDALKPVIEEIDQLYNQQDRAHEIEQLNKIMNNGVELVRNCLGLSWWKLISKWTYQDELTKLEESLRGFVSFDFTLQMGRNVLELQTRTRNQSFVFSCRPPKPPQFTVGLDVPLKELKMRLFNDASSVLVLSAAPGFGKTTLARKLCWDEEVIDKFKENIFFVTFSQNPKLSVIVAKLLQSGYELEQKFSSDEDAINQLETALRHMKKGPILLVIDDVWSYSEILVKKFEFQLPDYKILVTSRFKLERFGTPFCLEPLHDQEAIALFRHAVSLDGSSYSYQLEENEAKIVKACGGCPFALEVIGGSLRLQSPETWQRMVRELSKVHYILESDENLLRYLLKSLDVLGGKVNLKECFVDLGLFPEDQRIPASALIDMWVELHELDEDGVTAMNYIWELSKCNLAKVAVTRKLPLNEGNYYSRYFVTQHDILRALAIRQSSQGAVERRKRLAIDLSGENVRKWLIEEHQQELAAQILSISTDEKTSSWYAIEPSKAEVLILNLWAEEYSLPEFMNKMCKLKVLIMTNYGYSLLELKNFELLSSLPNLKRIRLEQISLPAYDAPLLLENLRKLSLFMCNTTQAIGGIANISLVMPNLVEINIDYCNDIIKLPAKLFDSVHLERLSITNCHKLSLLPEEIGKAKNLQILRLASCTDLEELPESIVDLDQLKLLDISDCINVETLPEKMDKLCNLRTLCIAGCSKLIELPSTVEDLNLKDIVYDEQTSGLWERFKSVLTSVRIHERKVEISFD* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00719 790 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Pte5g00719 790 PRINTS Disease resistance protein signature 335 349 - -
Pte5g00719 790 PRINTS Disease resistance protein signature 703 719 - -
Pte5g00719 790 PRINTS Disease resistance protein signature 247 261 - -
Pte5g00719 790 PRINTS Disease resistance protein signature 170 185 - -
Pte5g00719 790 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 401 IPR027417 -
Pte5g00719 790 Gene3D - 299 381 IPR042197 -
Pte5g00719 790 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 5 788 IPR039203 GO:0050832
Pte5g00719 790 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 10 134 IPR008808 -
Pte5g00719 790 SUPERFAMILY L domain-like 534 753 - -
Pte5g00719 790 Gene3D - 128 293 IPR027417 -
Pte5g00719 790 Gene3D Ribonuclease Inhibitor 498 766 IPR032675 -
Pte5g00719 790 Pfam NB-ARC domain 157 368 IPR002182 GO:0043531
Pte5g00719 790 Gene3D - 382 477 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00719 Pte-Chr5 10871626 10875178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00719 175 759 WRKY Transcription Factor Family AT5G45050 23.167 2.71e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00719 - - qsa:O6P43_018327 746.117