Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00711 ATGGCTGATGCCGCAGAGTTAGCGGCTAATGATATGCCGTTTGAAGTTGTATATTATCCAAGAGCCGGGAAGTCGGACTTTGTGGTGAAGGCGGAGTTGGTGGAGGCCGCGATGAATGTGTACTGGACGTTAGGGATGAGAGTGAAAATGGCTGTGGAGACCGAGGACTCGTCGAGGATGACACGGTTCCATGGGACCGTAGCCACTACTGCACCCCGTGATCTAGGGCCATGGCAGGGTTCTCCGTGGCGTTTGCTTCAGGTAGTGCGATATGCATTGGTTTTGCGTTCTTAA 294 0.5306 MADAAELAANDMPFEVVYYPRAGKSDFVVKAELVEAAMNVYWTLGMRVKMAVETEDSSRMTRFHGTVATTAPRDLGPWQGSPWRLLQVVRYALVLRS* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00711 97 Gene3D - 42 91 - -
Pte5g00711 97 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 88 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte5g00711 97 Pfam Auxin response factor 4 87 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00711 Pte-Chr5 10811847 10812140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00711 1 88 B3 DNA Binding Superfamily AT1G77850 57.955 1.75e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00711 - - zju:107420998 138.272