Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00710 ATGGAAAGAAGGTACATGTCTTCGTCGGAATTTGAAGTCGATGAGTCCTTGCCCTTTTATCTTGTTTATAAGAAAAAACTCTGTTCTTTTTCAAGCTTTTTCTTCATTGTCCGATGCATCTGCCTCCGCCGCGAAAGCAGTCCCCGTGGGCATTGGGAGCAAGCATCAACTCCTCCTCAGTTTCTATCAGCTCTCGTGCTCTCCAAGCCTTGTATTCTTTACCGGATTTCCGAAGTTAACTTCCATGCGGATCCTATTATGGACGAGGACAACTCGCCGGATAAGGACGTTGAAGGTGATGGCAAGATCTTGGCATTCGCTAAGATTCTGACGGAGTCCGATGCAAATAATGGCGGGGGATTCTCTGTTCCGCGGTTCTGTGCTGACTCGATTTTCCTGCCACTTAACTTTCAGGATGACCCGTCGGTGCAGACGGTCACAGTGACAGATGTTCATGGCATTGTTTGGGAGTTTAGACACATTTACAGGGGAACGCCGAGAAGGCACTTACTTACTACTGGATGGAGTAAGTTTGTGAATCATAAGAAGTTGGTCGCGGTTGACTCGGTGGTCTTCATAAAGAATTTGAAAGGAGAGATGTTTTTTGGAGTTCGTAGGTCTTTGTGA 627 0.4641 MERRYMSSSEFEVDESLPFYLVYKKKLCSFSSFFFIVRCICLRRESSPRGHWEQASTPPQFLSALVLSKPCILYRISEVNFHADPIMDEDNSPDKDVEGDGKILAFAKILTESDANNGGGFSVPRFCADSIFLPLNFQDDPSVQTVTVTDVHGIVWEFRHIYRGTPRRHLLTTGWSKFVNHKKLVAVDSVVFIKNLKGEMFFGVRRSL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00710 208 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 48 206 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte5g00710 208 CDD B3_DNA 106 206 IPR003340 GO:0003677
Pte5g00710 208 Gene3D - 103 208 IPR015300 -
Pte5g00710 208 Pfam B3 DNA binding domain 106 206 IPR003340 GO:0003677
Pte5g00710 208 ProSiteProfiles B3 DNA-binding domain profile. 106 208 IPR003340 GO:0003677
Pte5g00710 208 SUPERFAMILY DNA-binding pseudobarrel domain 102 206 IPR015300 -
Pte5g00710 208 FunFam Auxin response factor 104 208 - -
Pte5g00710 208 SMART B3_2 106 208 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00710 Pte-Chr5 10810605 10811679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00710 48 207 B3 DNA Binding Superfamily AT1G77850 53.846 3.40e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte5g00710 B3 2.9e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00710 - - qsa:O6P43_019702 229.18