Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00680 ATGTCTGAGGTTGTCTGTGTCACCGGAGCCAGTGGATGCATTGGATCATGGCTTGTCCACCTCCTTCTTGATCGTGGTTACACAGTGCACGCCACCGTCAAAGATCTCAAAGATGAGAGTGAGACGAAGCATCTAGAATCTTTCCAAGGAGCAAACACGAGTCTCTGTCTCTTCCAAATGGACCTCCTTGACTTCCAATCCATCCTCGCCGCTGTTCAAGGCTGCTCCGGCATCTTCCACGTTGCATCTCCTTGTGTCGTCGATCCAGTTCAAGACCCTCAGAAGGAACTGCTTGACCCGGCCATCAAAGGAACCCGGAACGTGATGACGGCGGCGAAGGGAGCTGGCGTGAAGCGCGTGGTGATCACTTCCTCTAGCTCAGCCATTTTTCCGAACCCGAAGTGGCCATCTGACATGGTTACCACAGAGGATTGCTGGACCGACGTTGAATACTGCAAACGAAAGGGGTTATGGTATCCGATGTCAAAAGCGCTTGCTGAGAAGGAGGCTTGGGAAATTGCAAAATCTGGTATAGATGTGGTTGTGGTGAATCCTGGTATGGTATTGGGTCCTGTCCTTTCTCCCAGACTCAATTCCAGCATGATCATCCTTTTGCGCCTTCTCCAAGGCTCCACTGAAACTCTCGAGGATGTGTTTATAGGACTTGTACATTTCAAAGATGTTGCGTTGGCACACATTTTAGTGTATGAAAATAAAGCTGCAAGTGGAAGGCACTTGTGTCTTGAGTCTATCTCTCACTATGGTGACTTTGCAGCTAAGGTTGCTGAACTATATCCCCAGTATAAAGTTCCTAGTTTGCCTAGAGATACTCAACCAGGGCTGTTGAGAGCACAGAATGGATCTAAGAAGCTGATAGGGCTGGGCCTCCAACTTATCCCCATTGAGCAAACTATCAAGGATGCAGTTGAGTGTTTGAAGAATCAAGGATTCATCTCATAA 960 0.4833 MSEVVCVTGASGCIGSWLVHLLLDRGYTVHATVKDLKDESETKHLESFQGANTSLCLFQMDLLDFQSILAAVQGCSGIFHVASPCVVDPVQDPQKELLDPAIKGTRNVMTAAKGAGVKRVVITSSSSAIFPNPKWPSDMVTTEDCWTDVEYCKRKGLWYPMSKALAEKEAWEIAKSGIDVVVVNPGMVLGPVLSPRLNSSMIILLRLLQGSTETLEDVFIGLVHFKDVALAHILVYENKAASGRHLCLESISHYGDFAAKVAELYPQYKVPSLPRDTQPGLLRAQNGSKKLIGLGLQLIPIEQTIKDAVECLKNQGFIS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00680 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 313 IPR036291 -
Pte5g00680 319 Pfam NAD dependent epimerase/dehydratase family 5 241 IPR001509 -
Pte5g00680 319 Gene3D - 1 319 - -
Pte5g00680 319 CDD FR_SDR_e 5 296 - -
Pte5g00680 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 309 - -
Pte5g00680 319 FunFam Cinnamoyl-CoA reductase 1 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00680 Pte-Chr5 9687382 9695397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00680 3 320 Monolignol Biosynthesis Gene Families AT5G58490 69.279 3.84e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00680 - - zju:107411559 504.597