Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00668 ATGAACATTCATCATCATGTCATGGTAGTCTTTTCATATTCACTTGTTTTTACTTGTCTCAAAATGTTCATAGCAGTTGAATCCATTTCTCAAGCTCGGAGCTTTCATGATCAAGACATGAACTCATTTCTCAACCATGATAGATTTCAAATGGGATTTTCAAGTGCTGGCAGCTCTTATAATCCTATGAAGACAGGTTTGAGGTACAAGCTGGGGCAACCCGATTCGGCAATTCGTCTTGGTAAACATCTGGTTACAGAAATAAGTCCAGACAGCAGTCCACTTCCTCACGACATGTTTGTTAGTAAGTTCCTCCAGGTCAGAGAAGCAGACACTCTCCAACTTGGGACTTCACCTTCTGGACCTAGTCCCAGCTCTGATTCTCACCTATGTGATACTCATGGCCTCTGTGGAGTGTATGGGGTTTGTAATGTTAGCAATTCACCGGTATGTGAATGCCTGCAAGGCTTCAAGCCGGCGTCACAACAGGAATGGACCTCAATGAATTGGTCTCAAGGGTGTGTGAGAGATAGGGCTTTGAATTGTAATGTCGGCGATCAATTTATCCTATTGGTTGGTATTAAATTGCCAGATGGTATTCAAAGTATAATCGACCAGAGCATTGGTTTGCAGGAATGCGGACAGAACTGTTTGAGAAATTGTTCTTGCAAAGCATACTCAATGGTTACAAATAATGATACTGGAATTGGATCTTTGTTCCCAATTGGTTGTTCAATGTGGTTTGTTGACCTGATTAACATTAGACATTTGTCATCTGGTGGGCAGAATCTATATGTTCGAATTGCTGCTTCAGAATCAGTTAACAATGGAGGGAGCAAGAAGAAGGTTACTATAATAGTGTGTGTCACTCTCCTCGCCATTGCTGTTACACTTGTTTTGGTTGTGTGTTACCTTTTCAAGTTCAAAGGGAGAAAACTCAAAGGAGGGGTACAGATGGGGAATATGAAAGACCAGCAAGCACAAATGGAAGATTTGGATCTCCCACTGTTCGACCTAGCAACTATAATCACTGCCACAGATAACTTCTCAATGAACAACAAGCTTGGAGAGGGTGGCTATGGCCCTGTATATTGGGGGAAACTAGTGGATGGTCAAGAAATTGCTGTGAAGAGGCTTTCACTTAGCTCAGGACAAGGATTGACCGAGTTCAAGAACGAAGTTAAACTAATTGCTAAAGTTCAGCACCGCAATTTGGTGAGGCTTCTTGGTTGTTGCATTCAAGGAGAGGAAAAGATGCTGATATATGAATACATGCCTAACAAAGGCTTAGACTCCTTCCTCTTTGATGAAACTAGAAGAAAATTGCTTGATTGGCCTAAGCGCTTCCAGATTATTAATGGAATTGCTAGAGGGCTACTCTATCTACATGAGGAATCCAGATTGACAATTATTCACAGAGACCTCAAAGCGAGTAATGTTTTGCTTGACTATCAGTTTAACCCGAAAATTTCTGATTTTGGCATGGCCAGAAGTTTTGGGGGAGATGAGACAGAAGCAAATACAAGACGAATAGTTGGCACTTTGTATGCACCGTAA 1557 0.4162 MNIHHHVMVVFSYSLVFTCLKMFIAVESISQARSFHDQDMNSFLNHDRFQMGFSSAGSSYNPMKTGLRYKLGQPDSAIRLGKHLVTEISPDSSPLPHDMFVSKFLQVREADTLQLGTSPSGPSPSSDSHLCDTHGLCGVYGVCNVSNSPVCECLQGFKPASQQEWTSMNWSQGCVRDRALNCNVGDQFILLVGIKLPDGIQSIIDQSIGLQECGQNCLRNCSCKAYSMVTNNDTGIGSLFPIGCSMWFVDLINIRHLSSGGQNLYVRIAASESVNNGGSKKKVTIIVCVTLLAIAVTLVLVVCYLFKFKGRKLKGGVQMGNMKDQQAQMEDLDLPLFDLATIITATDNFSMNNKLGEGGYGPVYWGKLVDGQEIAVKRLSLSSGQGLTEFKNEVKLIAKVQHRNLVRLLGCCIQGEEKMLIYEYMPNKGLDSFLFDETRRKLLDWPKRFQIINGIARGLLYLHEESRLTIIHRDLKASNVLLDYQFNPKISDFGMARSFGGDETEANTRRIVGTLYAP* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00668 518 ProSiteProfiles Protein kinase domain profile. 349 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00668 518 Pfam PAN-like domain 182 254 IPR003609 -
Pte5g00668 518 SUPERFAMILY Protein kinase-like (PK-like) 330 516 IPR011009 -
Pte5g00668 518 Pfam S-locus glycoprotein domain 128 160 IPR000858 GO:0048544
Pte5g00668 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Pte5g00668 518 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 316 424 - -
Pte5g00668 518 CDD PAN_AP_plant 180 269 - -
Pte5g00668 518 Pfam Protein tyrosine and serine/threonine kinase 350 505 IPR001245 GO:0004672|GO:0006468
Pte5g00668 518 ProSiteProfiles PAN/Apple domain profile. 182 269 IPR003609 -
Pte5g00668 518 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 105 515 - -
Pte5g00668 518 SMART ntp_6 183 268 IPR003609 -
Pte5g00668 518 SMART serkin_6 349 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g00668 518 Gene3D Phosphorylase Kinase; domain 1 313 424 - -
Pte5g00668 518 Gene3D Transferase(Phosphotransferase) domain 1 425 517 - -
Pte5g00668 518 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 425 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00668 Pte-Chr5 9370390 9372606 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00668 278 514 Receptor kinase-like Gene Family AT4G05200 53.333 1.33e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte5g00668 PK_Tyr_Ser-Thr 4.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00668 - - tcc:18593755 470.314