Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00625 ATGGCAACCGATACAGGAAGAAGGTTGGAGGACTGGGAAGATGCGTTAGATAAATATAAAAGCATCCCTGAAGGAGATATCGTTAACAAACTTAAAATAAGCTATGATGAACTGGACGATTTTGAGCGAAAAATCTTCCTTGATATTGCATGTTTCTTCAAGGGAGAGGGTTACGAATATGTACGAAGAATTTTAGAAGCTTCTGATCTGAACCCAACTATTGGGTTGAAGAAACTTGTTGAGAGGGGACTTTTAACTGGGAGCTACCGTACGGTTCAGATGCATTGTCTGATACAGGAGATGGGAAGGGAAATAATTCAAAGGGAATCACGGTCAAATGTTGGGGAACGAAGCAGATTGTGGCATCATGAGGATGTTATTCAAGTGTTAACTGATGATACTGGAACGAATGCGGTAGAGGGTATCATGTTGGACGTGCCTGATGAGTCTGAATTGGAGGAGATAGAATGGAATGGCGAGGGTTTTAAAAAGATGAAAAGTTTGAGAATACTCATAATAAGGAATGCATGTTTTTCAACTGCACCAACTTATCTACCTAACAGTTTGAGAGTTCTTCATTGGGAGAACTATCCTTCATCATCTTTTCCCCCAGCTAGCTTTCATCCAAAGAAACTTGCCATACTCAAAGTCCCTTATAGTCATCTCACGTTGACAGAAAAGCCATTCAAGAGGTTGGAAGCTCTAACAGAAATGAAATTCTCTTTCTGTGACTTCATAACTAAAGTACCTGACCTGTCTGGCGTCCCAAATTTAGAAGTACTTGCCCTAAGTGGATGTCTGAATTTGGTTGAGCTTACGACTCTTCCTCAAGCCTTGAAGCTTAGGAAACTTACAAAACTTTACCTAAACGAATGCTCCAAACTTAGGCGATTTCCAGACATACAGGAACCATTGGAAAATCTTGAGCAGCTTTATTTAGATGGAAGTGGTATTGAAGCATTTCCATCTTCAATTAAATATATGACTATTTTGAAGTTGCTCCGTTTGCAAAATTGCAAAAGACTGGAGTTTGTTCCGCATACCATTGCCCAGATGCAATCACTTGAGAGACTTAACTTCTATTATTGTCCACTGATTAGAAATGCTCTTTCAAGTTGGGTTGAATCTACTGAAGTGGATTGCTCAACATCATCATCGTCGTTTTCATTGTCATTAAAATCGTTTGATCTCAATATCTGTTATAATATTTCAAAGCTCTATCTAGATGGCTGCAATTTACTAGATGAACACCTTGTCTTGATTCCCAATCTTTTCCCGTTGCTGAAATATTTGTCTCTAAGAGAAAATCCGTTTGAAGTTATTCCAGAGTGCTTCCGAGCATTCCAACATCTAGAGATCCTGAATTTGGATTTCTGTAGGAAGCTTCAAGAAATTCCAAATATCCTTCCAGATATGCCAAAATTGAGAATGATAAGTGCTAGGAATTGCGTGGTATTGAGCCCACAGTCTGTGGCTTTCTTTTTGAAGGATGTGATGAAGGATGCAGAATTCATGAATGGTTTCATCATCGTTCTGAGGGGATGTCAATATCCTTTTATGCACGTGGAAATTACTTCTTTCAATTTCTTTTATGTGTATGTTATGATGTAA 1611 0.3867 MATDTGRRLEDWEDALDKYKSIPEGDIVNKLKISYDELDDFERKIFLDIACFFKGEGYEYVRRILEASDLNPTIGLKKLVERGLLTGSYRTVQMHCLIQEMGREIIQRESRSNVGERSRLWHHEDVIQVLTDDTGTNAVEGIMLDVPDESELEEIEWNGEGFKKMKSLRILIIRNACFSTAPTYLPNSLRVLHWENYPSSSFPPASFHPKKLAILKVPYSHLTLTEKPFKRLEALTEMKFSFCDFITKVPDLSGVPNLEVLALSGCLNLVELTTLPQALKLRKLTKLYLNECSKLRRFPDIQEPLENLEQLYLDGSGIEAFPSSIKYMTILKLLRLQNCKRLEFVPHTIAQMQSLERLNFYYCPLIRNALSSWVESTEVDCSTSSSSFSLSLKSFDLNICYNISKLYLDGCNLLDEHLVLIPNLFPLLKYLSLRENPFEVIPECFRAFQHLEILNLDFCRKLQEIPNILPDMPKLRMISARNCVVLSPQSVAFFLKDVMKDAEFMNGFIIVLRGCQYPFMHVEITSFNFFYVYVMM* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00625 536 Gene3D Ribonuclease Inhibitor 144 298 IPR032675 -
Pte5g00625 536 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 346 IPR044974 GO:0006952
Pte5g00625 536 SUPERFAMILY "Winged helix" DNA-binding domain 26 130 IPR036390 -
Pte5g00625 536 SUPERFAMILY L domain-like 94 489 - -
Pte5g00625 536 Gene3D Ribonuclease Inhibitor 299 502 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00625 Pte-Chr5 7422288 7426187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00625 38 363 WRKY Transcription Factor Family AT4G12020 37.363 2.28e-55 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00625 - - lja:Lj0g3v0128709.1 368.237