Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00621 ATGGAAGTAAACAAAGAAAAAGCTCTCAAAGCATTGCGGATTGCCGAGAAGCAATTTGCTCAGAGAGATTTTGCTGGTGCACAGACTTATGCTTTAAAGGCCAAAACACTGTATCCAGGACTGGAGGGTATATCTCAAATAATTGCAACTTTTGAAGTTTACTGTGCTTCTGAGACTACATTTAATGGGGAACCAGATTATTATTCTATTCTGGGCTTAAAACCTTCAGCTGATAGAGAAGCCATGAAAAGTCATTACAAAAAAATGGCTGTGATGCTCCACCCTGACAAAAATAAATGTGTTGGAGCTGATGGAGCATTTAAGCTAGTTTCTGAAGCCTGGAATTTGTTGTCCGATAATGCTAAGAGAAGCTCTTATGATCTCAGGAGAAATCAACAATTTGCTGCAGGATATAGTCAGACCAATTTTTCATCTGGTCATGCTACTGGTTATAATACTTGTTCCAATTTGTCGACTCCTCATGTTAGGCGTGACACTTTCTGGACCATCTGCACATCTTGTAAGGTTCAATATGAATATCTGCGCAAGTATGTGAACAAGAGACTTTCTTGTAAGAACTGTCGCAGCACCTTTGTTGCTGTGGAAACCGGAGCACCCCCTGGAAATGGTTCGTTCCCTTATAGCCAGTGGCCATACATCCCTAATAATGGATATGGAAGTCATTCATATGATGGGGTGACTTATGTTTCTAGCAATTCCAACTTTTACAATGGCAACGGGATCTCAGGATACCATTCACCACACAGTTATGAATATGTTTCAAATGTTTCATTTCAGTGGAATTCTTCATTGGGAACTTCTGCTGGAGTTATTAGCCAGAACAGGCAAAGTGGTATATCTGCTGACTCTGTTTACCTCTCCAACCAAGGCATAAAGAAAGGAAGAGGAAAGATTTTTCCTGGAGCTGACAAGAATCCTTCTTTGATTGAAACTACAGTTCCTCCAAATTCGAGTGTCACTATCAGCTTTGATGTAAATGCACAACAAGAAACTAAGCCTTGTTGGCCTGATAAAAGAAGGAAAATCGTCGTGGATGCCACCTTTAGGAATGGCAGTGATGTGAAGGGACCAAAATCTGCTCCTGAAGCGGTGCTAACCGCTGGAAACACGACTGCTGTCTCAAACCAGAAGCCTTCCTGCACAACAGAAGTTCCAAATAAACAATTTCCATCACCGCCTGCATTTGATGTTAGGAAAATGTTGATTGAGAAGGCCAGAACTGAAATCCGGAAGAAGCTGGAAGAGATGAAGTTAGATGCAGATACAGCTGCTGCTGCTGCTGCTGCTGCTGCAGTGAAGGAGAAAGAAAAAGCCATAACTGAACAAAGTGACGTTGGTTGTTTTCCAGTTGGTCAATGCAAGAGAGAGGTGTCTCGAAAACCAGATGCTTCTAGTCAAGAATTGGAACCTAGGAAGACTTCTCCAATTTCAATAACGGTCCCAGATCCGGACTTTCATGACTTTGACAGTGATAGGTTAGAAGAGTGCTTCAAGCCAAAGCAAATATGGGCATTGTATGATGAAGAGGATGGTATGCCTCGTTTGTACTGTCTTGTACGTGAAGTTGTGTCAGTTAAGCCATTTAAGATTCTTATCAGTTACTTGAGCTCTAAGTCTGACACTGAATTTGGTTGGGACAACTTGCTTAGTTCTGCTTTTACCAAATCTTGTGGACATTTCAGGGCTTGCAATTCTGATGTTGTTGATCAAGTTAACATTTTCTCACATGCTTTAAGCCGTGAGAAGGCCGGTAGGGGTGGTTGCATTCGCATTTATCCTCGGAGTGGAGACATTTGGGCAGTCTACCGAAACTGGTCTCCAGATTGTGATAGTTCAACTCCAGATGAAGTGAGACACCAGTATGAAATGGTTGAGGTTCTTGATGATTACTCTGAAGATCTTGGCATTTGCGTTATCCCCCTTGTTAAATTAGCTGGATATAAAACAGTATATTGCAGGAGTGCAGATAAAACCGCCATTAGATGGATACCCAAAAGAGAGATGCTACGCTTTTCACACCAAGTACCATCTTGGTTGCTCACTAAAGAAGCTTGTAATTTGCCAGAGAGATGCTGGGATTTGGATCCTGCTGCGACCCCAGATGAGCTTCTTCATTCTTAA 2142 0.4197 MEVNKEKALKALRIAEKQFAQRDFAGAQTYALKAKTLYPGLEGISQIIATFEVYCASETTFNGEPDYYSILGLKPSADREAMKSHYKKMAVMLHPDKNKCVGADGAFKLVSEAWNLLSDNAKRSSYDLRRNQQFAAGYSQTNFSSGHATGYNTCSNLSTPHVRRDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRSTFVAVETGAPPGNGSFPYSQWPYIPNNGYGSHSYDGVTYVSSNSNFYNGNGISGYHSPHSYEYVSNVSFQWNSSLGTSAGVISQNRQSGISADSVYLSNQGIKKGRGKIFPGADKNPSLIETTVPPNSSVTISFDVNAQQETKPCWPDKRRKIVVDATFRNGSDVKGPKSAPEAVLTAGNTTAVSNQKPSCTTEVPNKQFPSPPAFDVRKMLIEKARTEIRKKLEEMKLDADTAAAAAAAAAVKEKEKAITEQSDVGCFPVGQCKREVSRKPDASSQELEPRKTSPISITVPDPDFHDFDSDRLEECFKPKQIWALYDEEDGMPRLYCLVREVVSVKPFKILISYLSSKSDTEFGWDNLLSSAFTKSCGHFRACNSDVVDQVNIFSHALSREKAGRGGCIRIYPRSGDIWAVYRNWSPDCDSSTPDEVRHQYEMVEVLDDYSEDLGICVIPLVKLAGYKTVYCRSADKTAIRWIPKREMLRFSHQVPSWLLTKEACNLPERCWDLDPAATPDELLHS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00621 713 Pfam DnaJ domain 66 127 IPR001623 -
Pte5g00621 713 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pte5g00621 713 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pte5g00621 713 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pte5g00621 713 PRINTS DnaJ domain signature 122 141 IPR001623 -
Pte5g00621 713 SMART dnaj_3 65 122 IPR001623 -
Pte5g00621 713 CDD DnaJ 66 119 IPR001623 -
Pte5g00621 713 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pte5g00621 713 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pte5g00621 713 PANTHER BNAC03G44070D PROTEIN 1 707 - -
Pte5g00621 713 Pfam Domain of unknown function (DUF3444) 483 690 IPR024593 -
Pte5g00621 713 Gene3D DnaJ domain 63 168 IPR036869 -
Pte5g00621 713 SUPERFAMILY Chaperone J-domain 63 141 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00621 Pte-Chr5 7312019 7315682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00621 4 313 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.354 4.97e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00621 - - gmx:100788692 976.081