Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g00619 ATGGAGTGCTTTCCATCACTAAGGTCATGTCCTCTACGCAGTCCCAAGCTGTATGTTTCGTGTTCTCCTTCAATCTCATGTAGAAGGCAATTCAATGCAGTGTCCTGCAGAACCGCTAGGCAAACTGCAACATGTGGGGTTAGCAGCGGCAGTAACAGCAATTTCTACAAGGTGCTGTCTCTGAGTACAAAGAGTGCAACGACCGATGAAATCAAAAGGGCATACCGAGCAATGGCTCTTAGGTATCATCCTGATGTATGTCATGATCCTTCATTAAAGGAAGATTCGACCAAGATGTTTGTTCTACTGAATGAAGCTTACAAGACACTATCGAATCCATCACTGCGCCAAGAGTACGATGATTGCGTGATGGGTTTGAGATCAAGCATGGAGGAGAGTAGGAAAAGGTGGCAAGATCAGATTGCTGAGTTGAGGAGAAGGGCTGCAGGCATGGAAGGAAAGAGAGGATCCTGGGGCAGCAGAATGAGAGCTAAAAACAAAGAAAGAGTTGTTTAA 516 0.4554 MECFPSLRSCPLRSPKLYVSCSPSISCRRQFNAVSCRTARQTATCGVSSGSNSNFYKVLSLSTKSATTDEIKRAYRAMALRYHPDVCHDPSLKEDSTKMFVLLNEAYKTLSNPSLRQEYDDCVMGLRSSMEESRKRWQDQIAELRRRAAGMEGKRGSWGSRMRAKNKERVV* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g00619 171 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 27 168 - -
Pte5g00619 171 MobiDBLite consensus disorder prediction 152 171 - -
Pte5g00619 171 Pfam DnaJ domain 54 120 IPR001623 -
Pte5g00619 171 SUPERFAMILY Chaperone J-domain 20 119 IPR036869 -
Pte5g00619 171 ProSiteProfiles dnaJ domain profile. 54 123 IPR001623 -
Pte5g00619 171 CDD DnaJ 54 112 IPR001623 -
Pte5g00619 171 SMART dnaj_3 53 115 IPR001623 -
Pte5g00619 171 PRINTS DnaJ domain signature 57 75 IPR001623 -
Pte5g00619 171 PRINTS DnaJ domain signature 95 115 IPR001623 -
Pte5g00619 171 PRINTS DnaJ domain signature 75 90 IPR001623 -
Pte5g00619 171 Gene3D DnaJ domain 42 147 IPR036869 -
Pte5g00619 171 Coils Coil 127 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g00619 Pte-Chr5 7179885 7180567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g00619 56 120 C2H2 Transcription Factor Family AT1G74250 41.791 2.95e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g00619 - - qsa:O6P43_012313 151.754